RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 B8ZZF3 427 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 EEDO75530 441 aaKnown RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 HIST1H1TP22492 207 aaPredicted RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 XCR1P46094 333 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 FOXL2P58012 376 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 RPS18P62269 152 aaKnown RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 ERV3-1Q14264 604 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 NCF4Q15080 339 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 FAM69BQ5VUD6 431 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 Q6ZSR9 355 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 SHISA5Q8N114 240 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 STT3BQ8TCJ2 826 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 CHTF18Q8WVB6 975 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 TUBGCP3Q96CW5 907 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 MAPKAP1Q9BPZ7 522 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 NUF2Q9BZD4 464 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 LRTM1Q9HBL6 345 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 HAO1Q9UJM8 370 aa12.89□□□□□ -0.35
LMNA-210ENST00000469565 PTRH2Q9Y3E5 179 aaKnown RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 MRPS18BQ9Y676 258 aaKnown RBP12.89□□□□□ -0.35
LMNA-210ENST00000469565 GNG14A0A1W2PPG7 69 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 FAM227AF5H4B4 570 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 SLCO1B7G3V0H7 640 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 B4GALT2O60909 372 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 PEX11AO75192 247 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 CDC123O75794 336 aaPredicted RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 MYO1DO94832 1006 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 ALBP02768 609 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 JUNP05412 331 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 CD63P08962 238 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 ZGLP1P0C6A0 271 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 RNH1P13489 461 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 LIFP15018 202 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 CPN2P22792 545 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 F8A1P23610 371 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 ARFIP1P53367 373 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 MAPK12P53778 367 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 GYS2P54840 703 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 LIM2P55344 173 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 RAB38P57729 211 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 BROXQ5VW32 411 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 CDC26Q8NHZ8 85 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 FKBP10Q96AY3 582 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 C19orf60Q96EN9 201 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 EBPLQ9BY08 206 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 DPH1Q9BZG8 443 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 DDX31Q9H8H2 851 aaKnown RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 VTI1BQ9UEU0 232 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 GIMAP2Q9UG22 337 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 IL17BQ9UHF5 180 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 DAPP1Q9UN19 280 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
LMNA-210ENST00000469565 SPACA6W5XKT8 324 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 PTPRQQ9UMZ3 2332 aa12.88□□□□□ -0.35
LMNA-210ENST00000469565 NUP210LQ5VU65 1888 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 CFAP46Q8IYW2 2715 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 A0A0A6YYD5 115 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 C21orf140B9A014 251 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 HDAC3O15379 428 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 TMPRSS11DO60235 418 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 PCDH7O60245 1069 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 CNOT3O75175 753 aaKnown RBP12.87□□□□□ -0.35
LMNA-210ENST00000469565 JRKO75564 520 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 BMP10O95393 424 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 ONECUT2O95948 504 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 HEXBP07686 556 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 FAM58BPP0C7Q3 252 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 PTPN4P29074 926 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 TPP2P29144 1249 aaPredicted RBP12.87□□□□□ -0.35
LMNA-210ENST00000469565 FOLR3P41439 243 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 TSFMP43897 325 aaKnown RBP12.87□□□□□ -0.35
LMNA-210ENST00000469565 UCNP55089 124 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 HNRNPH2P55795 449 aaKnown RBP12.87□□□□□ -0.35
LMNA-210ENST00000469565 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
LMNA-210ENST00000469565 RPL38P63173 70 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms