RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 GTF2H4Q92759 462 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 ZNF501Q96CX3 271 aaPredicted RBP12.15□□□□□ -0.46
RUNX1-213ENST00000469087 PRPF18Q99633 342 aaKnown RBP12.15□□□□□ -0.46
RUNX1-213ENST00000469087 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
RUNX1-213ENST00000469087 ROGDIQ9GZN7 287 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 IL1RL2Q9HB29 575 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 FGF21Q9NSA1 209 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 MAPRE3Q9UPY8 281 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 A0A0A6YYC8 382 aaPredicted RBP12.15□□□□□ -0.46
RUNX1-213ENST00000469087 I3L1I5 382 aaPredicted RBP12.15□□□□□ -0.46
RUNX1-213ENST00000469087 SGK494L7N484 410 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 PGRMC2O15173 223 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 B3GALT2O43825 422 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 HPCAL1P37235 193 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 ALDH9A1P49189 494 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 LIM2P55344 173 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 KCNJ2P63252 427 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 GRM7Q14831 915 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 STPG1Q5TH74 334 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 DLEU7Q6UYE1 221 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 ANKRD46Q86W74 232 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 DEFB107AQ8IZN7 70 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 DPP10Q8N608 796 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 OR5T3Q8NGG3 340 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 STARD8Q92502 1023 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 PPCDCQ96CD2 204 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 MTERF3Q96E29 417 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 SLC39A3Q9BRY0 314 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 DUSP26Q9BV47 211 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 ANKHQ9HCJ1 492 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 SERHLQ9NQF3 203 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 C5AR2Q9P296 337 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 SERTAD3Q9UJW9 196 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 DAPP1Q9UN19 280 aa12.15□□□□□ -0.46
RUNX1-213ENST00000469087 NUP214P35658 2090 aaPredicted RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 A0A088AWK7 358 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 GLOD5A6NK44 160 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 FXYD1O00168 92 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 DLL1O00548 723 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 DRD2P14416 443 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 ZNF10P21506 573 aaPredicted RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 PDX1P52945 283 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 DMTNQ08495 405 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 FAM53BQ14153 422 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 NDUFA9Q16795 377 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 CCDC157Q569K6 752 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 GARNL3Q5VVW2 1013 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 R3HCC1LQ7Z5L2 792 aaKnown RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 MIEF2Q96C03 454 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 ROPN1LQ96C74 230 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 LRRC58Q96CX6 371 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 CDC6Q99741 560 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 WDR41Q9HAD4 459 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 MIEF1Q9NQG6 463 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 LYARQ9NX58 379 aaKnown RBP12.14□□□□□ -0.47
RUNX1-213ENST00000469087 PCDHGA7Q9Y5G6 932 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 SCN2AQ99250 2005 aa12.14□□□□□ -0.47
RUNX1-213ENST00000469087 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PRSS51A0A1B0GVH4 220 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TBX19O60806 448 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 GUCY1B2O75343 617 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 RDH16O75452 317 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 AIFM1O95831 613 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 RPL3P39023 403 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 GCGRP47871 477 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 EMP3P54852 163 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 NFYCQ13952 458 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CAPRIN1Q14444 709 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 C16orf72Q14CZ0 275 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 MUM1Q2TAK8 710 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 C16orf89Q6UX73 402 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 HACD2Q6Y1H2 254 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 GPR135Q8IZ08 494 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 FAM47BQ8NA70 645 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CIDECQ96AQ7 238 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 GPATCH1Q9BRR8 931 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 INPP5KQ9BT40 448 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 THTPAQ9BU02 230 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 FAIM2Q9BWQ8 316 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 SLC6A13Q9NSD5 602 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CUTCQ9NTM9 273 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms