RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 CLK4Q9HAZ1 481 aaKnown RBP12.37□□□□□ -0.43
SCAP-210ENST00000468965 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 IFT80Q9P2H3 777 aaPredicted RBP12.37□□□□□ -0.43
SCAP-210ENST00000468965 TRPC4Q9UBN4 977 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 DAPP1Q9UN19 280 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 DLGAP4Q9Y2H0 992 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 POLR3HQ9Y535 204 aaPredicted RBP12.37□□□□□ -0.43
SCAP-210ENST00000468965 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 MED13Q9UHV7 2174 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 TPRP12270 2363 aaKnown RBP12.37□□□□□ -0.43
SCAP-210ENST00000468965 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
SCAP-210ENST00000468965 VSTM2BA6NLU5 285 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 C9J4A7 227 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 FAM227AF5H4B4 570 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 PCDH7O60245 1069 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 SNX3O60493 162 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 PEX11AO75192 247 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 SEC22BO75396 215 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 BMP10O95393 424 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 ALBP02768 609 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 PIM1P11309 404 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 RNH1P13489 461 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 XCR1P46094 333 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 EFNA3P52797 238 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 RAB38P57729 211 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 SLAMF1Q13291 335 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 ERV3-1Q14264 604 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 NCF4Q15080 339 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 NKG7Q16617 165 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 RFTN2Q52LD8 501 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 C6orf136Q5SQH8 315 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 CCNYL2Q5T2Q4 361 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 FAM69BQ5VUD6 431 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 MLIPQ5VWP3 458 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 RIPOR1Q6ZS17 1223 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
SCAP-210ENST00000468965 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 PIGWQ7Z7B1 504 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 VASH2Q86V25 355 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 IL22RA1Q8N6P7 574 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 ENDOVQ8N8Q3 282 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 RFWD2Q8NHY2 731 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 THOC1Q96FV9 657 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 NAF1Q96HR8 494 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 METTL2AQ96IZ6 378 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 PPP3R2Q96LZ3 170 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 SPSB2Q99619 263 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 TRIM55Q9BYV6 548 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 WDR55Q9H6Y2 383 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 LYRM4Q9HD34 91 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 MKKSQ9NPJ1 570 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 KLHL14Q9P2G3 628 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 ZNF282Q9UDV7 671 aaPredicted RBP12.36□□□□□ -0.43
SCAP-210ENST00000468965 MCM8Q9UJA3 840 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 FBXW2Q9UKT8 454 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
SCAP-210ENST00000468965 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 ASPMQ8IZT6 3477 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 GOLGA8QA0A0J9YX86 632 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 GOLGA8OA6NCC3 632 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TRPC5OSA6NMA1 111 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 GOLGA8NF8WBI6 632 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 CYR61O00622 381 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 RAB40ALP0C0E4 278 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 ZGLP1P0C6A0 271 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TACR1P25103 407 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 EPHA3P29320 983 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 DLSTP36957 453 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 RPS18P62269 152 aaKnown RBP12.35□□□□□ -0.43
SCAP-210ENST00000468965 SF3A3Q12874 501 aaKnown RBP eCLIP12.35□□□□□ -0.431e-8■■■■■ 39.1
SCAP-210ENST00000468965 ATP6AP1LQ52LC2 224 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 C18orf63Q68DL7 685 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 NOXRED1Q6NXP6 359 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 CYP20A1Q6UW02 462 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 EPGNQ6UW88 154 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 UNQ6494/PRO21346Q6UXR6 183 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 SHISA6Q6ZSJ9 500 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 PRSS58Q8IYP2 241 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 FAM47BQ8NA70 645 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 CCDC197Q8NCU1 140 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TMEM52Q8NDY8 209 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 STT3BQ8TCJ2 826 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 UCN3Q969E3 161 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TBC1D20Q96BZ9 403 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TM4SF18Q96CE8 201 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 OR52B2Q96RD2 323 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 SIKE1Q9BRV8 207 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 C1orf50Q9BV19 199 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 YIPF2Q9BWQ6 316 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 TGIF2Q9GZN2 237 aa12.35□□□□□ -0.43
SCAP-210ENST00000468965 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
SCAP-210ENST00000468965 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms