RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SRMSQ9H3Y6 488 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 STN1Q9H668 368 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 MVB12BQ9H7P6 319 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 NOL11Q9H8H0 719 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 RDH14Q9HBH5 336 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 EML4Q9HC35 981 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 MID1IP1Q9NPA3 183 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SLCO1B3Q9NPD5 702 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 DNAJC11Q9NVH1 559 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 FGFR1OP2Q9NVK5 253 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 THAP1Q9NVV9 213 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 SIDT1Q9NXL6 827 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 STOX2Q9P2F5 926 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CPNE7Q9UBL6 633 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 OPTCQ9UBM4 332 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 POLG2Q9UHN1 485 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 ZDHHC2Q9UIJ5 367 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 PTBP2Q9UKA9 531 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TMCO1Q9UM00 188 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 TIMM22Q9Y584 194 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 HEBP2Q9Y5Z4 205 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 GON4LQ3T8J9 2241 aa3.92□□□□□ -1.78
TMEM39A-204ENST00000468545 CEP192Q8TEP8 1941 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TDRD6O60522 2096 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 EML5Q05BV3 1969 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 KIR2DS5A0A0G2JLQ3 304 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 A0A0G2JND7 137 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 A0A0G2JNG1 304 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 A0A1B0GTQ1 180 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CCDC189A1A4V9 331 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 VSTM5A8MXK1 200 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TMEM114B3SHH9 223 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TMEM233B4DJY2 109 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 DIRC3C9JPN6 131 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 E7ENX8 843 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 STX16-NPEPL1H3BU86 382 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 K7EPI3 171 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 KIR2DS3K7RE56 304 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 MYO1CO00159 1063 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 BTN3A3O00478 584 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TRIM38O00635 465 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 UBFD1O14562 309 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 OR7A17O14581 309 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 STX16O14662 325 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 PPM1DO15297 605 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 KLK8O60259 260 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 SH3BGRLO75368 114 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 UBXN7O94888 489 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 OR4F21O95013 312 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 EPN2O95208 641 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CER1O95813 267 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 ALPPL2P10696 532 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 PCNAP12004 261 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 XRCC1P18887 633 aaPredicted RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 DRD4P21917 467 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 PSMB5P28074 263 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 NDUFS1P28331 727 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 IMPA1P29218 277 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 PRDX3P30048 256 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 HMOX2P30519 316 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 ARRB2P32121 409 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 DPP6P42658 865 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 RXRGP48443 463 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 HNMTP50135 292 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 RPL14P50914 215 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 AP1S2P56377 157 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 OR1D5P58170 312 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 HERVK_113P63132 956 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CDKL1Q00532 357 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 IRF8Q02556 426 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TAP2Q03519 686 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 BTKQ06187 659 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TCF15Q12870 199 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 PRKAA1Q13131 559 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CHIT1Q13231 466 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 RCN2Q14257 317 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR18Q14330 331 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 GRB7Q14451 532 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 KIR2DS5Q14953 304 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 RBBP5Q15291 538 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 ZXDCQ2QGD7 858 aaPredicted RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 AMZ1Q400G9 498 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CCDC157Q569K6 752 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 XKR6Q5GH73 641 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 SPDYAQ5MJ70 313 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 SH2D4BQ5SQS7 431 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 NKAIN2Q5VXU1 208 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CLEC6AQ6EIG7 209 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 CAPN13Q6MZZ7 669 aaPredicted RBP3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 ARMC6Q6NXE6 501 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 IL27RAQ6UWB1 636 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 WASH2PQ6VEQ5 465 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 GPRIN3Q6ZVF9 776 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 RABEPKQ7Z6M1 372 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 SYVN1Q86TM6 617 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 TRIM73Q86UV7 250 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 AMIGO1Q86WK6 493 aa3.91□□□□□ -1.78
TMEM39A-204ENST00000468545 DDIASQ8IXT1 998 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms