RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RNF14Q9UBS8 474 aa22.8■■□□□ 1.24
PTCH1-210ENST00000468211 PTBP2Q9UKA9 531 aaKnown RBP22.8■■□□□ 1.24
PTCH1-210ENST00000468211 KLF13Q9Y2Y9 288 aaPredicted RBP22.8■■□□□ 1.24
PTCH1-210ENST00000468211 TEP1Q99973 2627 aaKnown RBP22.79■■□□□ 1.24
PTCH1-210ENST00000468211 PEX1O43933 1283 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 FAM155BO75949 473 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 STMN1P16949 149 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 AGAP20933 346 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 NR0B1P51843 470 aaKnown RBP22.79■■□□□ 1.24
PTCH1-210ENST00000468211 GPR85P60893 370 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 ZKSCAN8Q15776 578 aaPredicted RBP22.79■■□□□ 1.24
PTCH1-210ENST00000468211 PDK4Q16654 411 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 CDKL4Q5MAI5 379 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 SULT1C3Q6IMI6 304 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 TRIM40Q6P9F5 258 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 UBE3DQ7Z6J8 389 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF595Q8IYB9 648 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 TMEM156Q8N614 296 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 PDPRQ8NCN5 879 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 EXT2Q93063 718 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 DMRTA2Q96SC8 542 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 RUBCNLQ9H714 662 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 CNOT10Q9H9A5 744 aaKnown RBP22.79■■□□□ 1.24
PTCH1-210ENST00000468211 CD274Q9NZQ7 290 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 DAPP1Q9UN19 280 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 ADGRG4Q8IZF6 3080 aa22.79■■□□□ 1.24
PTCH1-210ENST00000468211 CLDN4O14493 209 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 HS6ST1O60243 411 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 CLDN14O95500 239 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 COX6B1P14854 86 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 GP5P40197 560 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 KIR3DL1P43629 444 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 MTTPP55157 894 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 ATP6V0D1P61421 351 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 DLG1Q12959 904 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 CALCOCO2Q13137 446 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 CMPK2Q5EBM0 449 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF793Q6ZN11 406 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 C3orf62Q6ZUJ4 267 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 POGLUT1Q8NBL1 392 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 CDKL2Q92772 493 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 KIAA1191Q96A73 305 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 PTCD3Q96EY7 689 aaKnown RBP22.78■■□□□ 1.24
PTCH1-210ENST00000468211 TRIM8Q9BZR9 551 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 ADAP2Q9NPF8 381 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 DEPPQ9NTK1 212 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 KCMF1Q9P0J7 381 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 TXNDC16Q9P2K2 825 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 HRH3Q9Y5N1 445 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 DNAJC13O75165 2243 aa22.78■■□□□ 1.24
PTCH1-210ENST00000468211 A0A088AWK7 358 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 A0A1B0GTH9 108 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 FAM187AA6NFU0 413 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 TFECO14948 347 aaPredicted RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 EIF3HO15372 352 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 CCNT2O60583 730 aaKnown RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 TFEBP19484 476 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF10P21506 573 aaPredicted RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 PTGER4P35408 488 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 C2orf54Q08AI8 447 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 ILF2Q12905 390 aaKnown RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF295-AS1Q8N0V1 137 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 ZNF321PQ8N8H1 164 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 ZFP62Q8NB50 900 aaPredicted RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 SPATA4Q8NEY3 305 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 C16orf52Q8NHV5 167 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 MTFMTQ96DP5 389 aaKnown RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 MRPS33Q9Y291 106 aaKnown RBP22.77■■□□□ 1.24
PTCH1-210ENST00000468211 POLQO75417 2590 aa22.77■■□□□ 1.24
PTCH1-210ENST00000468211 PINLYPA6NC86 204 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 KLRC4-KLRK1H3BQV0 150 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 RTCAO00442 366 aaKnown RBP22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CTNSO60931 367 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 SH3BGRLO75368 114 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 OR2J2O76002 312 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 ZFAND5O76080 213 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 SSR4P51571 173 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 RAB10P61026 200 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CHIT1Q13231 466 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 TRADDQ15628 312 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 ELAVL1Q15717 326 aaKnown RBP22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CYS1Q717R9 158 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 GDF7Q7Z4P5 450 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CMC1Q7Z7K0 106 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 PTPMT1Q8WUK0 201 aaPredicted RBP22.76■■□□□ 1.23
PTCH1-210ENST00000468211 MAPKAP1Q9BPZ7 522 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CCDC77Q9BR77 488 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 EFCAB11Q9BUY7 163 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 MS4A8Q9BY19 250 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 CD244Q9BZW8 370 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 ALG9Q9H6U8 611 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 COPS7BQ9H9Q2 264 aaPredicted RBP22.76■■□□□ 1.23
PTCH1-210ENST00000468211 RNF112Q9ULX5 631 aa22.76■■□□□ 1.23
PTCH1-210ENST00000468211 YARS2Q9Y2Z4 477 aaKnown RBP22.76■■□□□ 1.23
PTCH1-210ENST00000468211 E9PLN8 166 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 PRRG2O14669 202 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 OR6B1O95007 311 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 IFNA16P05015 189 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 IRF8Q02556 426 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 BMPR2Q13873 1038 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms