RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 SH2B3Q9UQQ2 575 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF148Q9UQR1 794 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 CD3EAPO15446 510 aaKnown RBP9.38□□□□□ -0.91
HDAC3-203ENST00000467533 PSMD3O43242 534 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 METTL18O95568 372 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 CDH1P12830 882 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 CHRM3P20309 590 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 IMPA1P29218 277 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 MARCKSL1P49006 195 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 RAB8AP61006 207 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 ZBED6P86452 979 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 RGS1Q08116 209 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 CDH17Q12864 832 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 ETFDHQ16134 617 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 SLC18A3Q16572 532 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 SLC22A10Q63ZE4 541 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 SYDE1Q6ZW31 735 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-203ENST00000467533 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 KATNAL2Q8IYT4 538 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 RCOR2Q8IZ40 523 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 TMEM132CQ8N3T6 1108 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
HDAC3-203ENST00000467533 PIGMQ9H3S5 423 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 CALHM2Q9HA72 323 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 LPAR3Q9UBY5 353 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 RIMKLBQ9ULI2 386 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 WIF1Q9Y5W5 379 aa9.38□□□□□ -0.91
HDAC3-203ENST00000467533 USF3Q68DE3 2245 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 E5RI56 91 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 OR1F1O43749 312 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 NRDCO43847 1150 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF354AO60765 605 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 TMCC2O75069 709 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 TRAPPC6AO75865 159 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 LRATO95237 230 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 IFNA16P05015 189 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ADRA1DP25100 572 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 FMO4P31512 558 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 IDUAP35475 653 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SOX18P35713 384 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 HNF4AP41235 474 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 RPS4XP62701 263 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 FAM27E3Q08E93 113 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SLC13A2Q13183 592 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PWP1Q13610 501 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 RPS6KA1Q15418 735 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ELAVL1Q15717 326 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 P3H1Q32P28 736 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PPP1R21Q6ZMI0 780 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SCUBE1Q8IWY4 988 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 REXO1L1PQ8IX06 675 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 GCNT2Q8N0V5 402 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 CA13Q8N1Q1 262 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 UTP15Q8TED0 518 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 INTS12Q96CB8 462 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ZC3HAV1LQ96H79 300 aaKnown RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF597Q96LX8 424 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 ZFP3Q96NJ6 502 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 NAP1L5Q96NT1 182 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-203ENST00000467533 FAM111AQ96PZ2 611 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SHARPINQ9H0F6 387 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PCBD2Q9H0N5 130 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SH2D2AQ9NP31 389 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PRTFDC1Q9NRG1 225 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 SLC6A5Q9Y345 797 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 CLCA3PQ9Y6N3 262 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 TGP01266 2768 aa9.37□□□□□ -0.91
HDAC3-203ENST00000467533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■■■■■ 27.2
HDAC3-203ENST00000467533 A8MXE2 369 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 H3BMM5 538 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TGFBR3LH3BV60 316 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 PJA2O43164 708 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 CYP4B1P13584 511 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 ACVR1BP36896 505 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 RNF4P78317 190 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 CCZ1BP86790 482 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TBL3Q12788 808 aaKnown RBP9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TOMM20Q15388 145 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 DCST1Q5T197 706 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 VASNQ6EMK4 673 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 CLNKQ7Z7G1 428 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 MPP5Q8N3R9 675 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 TBC1D19Q8N5T2 526 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 FAM13CQ8NE31 585 aa9.36□□□□□ -0.91
HDAC3-203ENST00000467533 OR5L2Q8NGL0 311 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms