RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FCRL5Q96RD9 977 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 TUBA1CQ9BQE3 449 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 OPN3Q9H1Y3 402 aaPredicted RBP11.46□□□□□ -0.57
UBR4-210ENST00000466969 NECTIN3Q9NQS3 549 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 KLHL8Q9P2G9 620 aaPredicted RBP11.46□□□□□ -0.57
UBR4-210ENST00000466969 H0Y3Z8 333 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 PSMD12O00232 456 aaPredicted RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 CLOCKO15516 846 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 STK10O94804 968 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 ACSL3O95573 720 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 FTLP02792 175 aaPredicted RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 FESP07332 822 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 TBXA2RP21731 343 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 PTPN6P29350 595 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 RPL21P46778 160 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 EIF3BP55884 814 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 RPS15AP62244 130 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 OLR1P78380 273 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 HERC3Q15034 1050 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 TMED2Q15363 201 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 DCST1Q5T197 706 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 GPSM1Q86YR5 675 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 WFDC8Q8IUA0 241 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 ZNF525Q8N782 197 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 PLD5Q8N7P1 536 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 NIPA2Q8N8Q9 360 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 STARD4Q96DR4 205 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 C11orf24Q96F05 449 aaPredicted RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 PDLIM2Q96JY6 352 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 DNAJC1Q96KC8 554 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 FOPNLQ96NB1 174 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 ZNHIT6Q9NWK9 470 aaKnown RBP11.45□□□□□ -0.58
UBR4-210ENST00000466969 MED29Q9NX70 200 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 IP6K2Q9UHH9 426 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 RNF115Q9Y4L5 304 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 SLC22A7Q9Y694 548 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 NINQ8N4C6 2090 aa11.45□□□□□ -0.58
UBR4-210ENST00000466969 C1QAP02745 245 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 CYP1A2P05177 515 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 APEHP13798 732 aaKnown RBP11.44□□□□□ -0.58
UBR4-210ENST00000466969 CHMP24386 653 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 LIMS1P48059 325 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 SLC6A12P48065 614 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 ABATP80404 500 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 BMPR2Q13873 1038 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 TOMM20Q15388 145 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 OCLNQ16625 522 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 MICALCLQ6ZW33 695 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 PID1Q7Z2X4 250 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
UBR4-210ENST00000466969 RAB3IL1Q8TBN0 382 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 PAQR8Q8TEZ7 354 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 ZNF597Q96LX8 424 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 RNF157Q96PX1 679 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 DOHHQ9BU89 302 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 TRAF4Q9BUZ4 470 aaPredicted RBP11.44□□□□□ -0.58
UBR4-210ENST00000466969 ABCF3Q9NUQ8 709 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 ARL15Q9NXU5 204 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 TMEFF2Q9UIK5 374 aaPredicted RBP11.44□□□□□ -0.58
UBR4-210ENST00000466969 B3GALT5Q9Y2C3 310 aa11.44□□□□□ -0.58
UBR4-210ENST00000466969 KCNE1BA0A087WTH5 132 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 H7BY64 318 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 H7C0S8 307 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 HPNP05981 417 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 CRHP06850 196 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 MYBL1P10243 752 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 CHRM3P20309 590 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 GCKP35557 465 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 LGALS3BPQ08380 585 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 SCGB2A2Q13296 93 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 GGTLC2Q14390 218 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 NIPAL1Q6NVV3 410 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 CLEC17AQ6ZS10 378 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 GRAMD2AQ8IUY3 354 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 OR5L2Q8NGL0 311 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 SLC13A3Q8WWT9 602 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 THAP11Q96EK4 314 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 TRIM11Q96F44 468 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 PRAP1Q96NZ9 151 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 OLFM3Q96PB7 478 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 UCN2Q96RP3 112 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 DNAJC11Q9NVH1 559 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 FAIMQ9NVQ4 179 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 CNIH4Q9P003 139 aa11.43□□□□□ -0.58
UBR4-210ENST00000466969 RUVBL2Q9Y230 463 aaKnown RBP11.43□□□□□ -0.58
UBR4-210ENST00000466969 ESPNB1AK53 854 aa11.42□□□□□ -0.58
UBR4-210ENST00000466969 GFYI3L273 518 aa11.42□□□□□ -0.58
UBR4-210ENST00000466969 APOL1O14791 398 aa11.42□□□□□ -0.58
UBR4-210ENST00000466969 GALR3O60755 368 aaPredicted RBP11.42□□□□□ -0.58
UBR4-210ENST00000466969 ZNF354AO60765 605 aaPredicted RBP11.42□□□□□ -0.58
UBR4-210ENST00000466969 RGS9O75916 674 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms