RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SEC16AO15027 2179 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 PCM1Q15154 2024 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 FAM237AA0A1B0GTK4 181 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 A0A1B0GVC2 190 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 SOX30O94993 753 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 TUBB4AP04350 444 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 EIF2S1P05198 315 aaKnown RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 CREB1P16220 341 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 CCNCP24863 283 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 PSMA2P25787 234 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 PTX3P26022 381 aaPredicted RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 OPRM1P35372 400 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 IDUAP35475 653 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 SLC26A3P40879 764 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 GRIA3P42263 894 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 ITGA8P53708 1063 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 OCRLQ01968 901 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 SQLEQ14534 574 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 IHHQ14623 411 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 NAA25Q14CX7 972 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 MFSD4BQ5TF39 518 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 GARNL3Q5VVW2 1013 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 FAM151BQ6UXP7 276 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 DAAM2Q86T65 1068 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 NT5DC3Q86UY8 548 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 MEX3DQ86XN8 651 aaKnown RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 PHF13Q86YI8 300 aaPredicted RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 FBXW8Q8N3Y1 598 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 RELL2Q8NC24 303 aaPredicted RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 PPP1R14CQ8TAE6 165 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 FLVCR1-AS1Q8TAF5 88 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 ZNF398Q8TD17 642 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 NELFBQ8WX92 580 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 HSPH1Q92598 858 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 ARL8AQ96BM9 186 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 MMABQ96EY8 250 aaPredicted RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 TRMT61AQ96FX7 289 aaKnown RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 LPAR4Q99677 370 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 MLST8Q9BVC4 326 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 TRIM7Q9C029 511 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 OR52A5Q9H2C5 316 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 LDAHQ9H6V9 325 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 EXO5Q9H790 373 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 COG4Q9H9E3 785 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 ZNF701Q9NV72 531 aaPredicted RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 ZNF226Q9NYT6 803 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 NFS1Q9Y697 457 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.41□□□□□ -1.54
NCL-208ENST00000466274 ZANQ9Y493 2812 aa5.41□□□□□ -1.54
NCL-208ENST00000466274 IGHV3-20A0A0C4DH32 117 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 A0A1W2PPR1 153 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 GOLGA6L6A8MZA4 724 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 EEF1E1-BLOC1S5C9J1V9 151 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TXNDC9O14530 226 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 GAPDHSO14556 408 aaPredicted RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 EEF1E1O43324 174 aaKnown RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 HCN1O60741 890 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 MFAP3LO75121 409 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 AP2A1O95782 977 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 IGHG3P01860 377 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 JUNP05412 331 aaKnown RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 HNF1AP20823 631 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 NR4A1P22736 598 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TIMP3P35625 211 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 PRLHRP49683 370 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 RPL7AP62424 266 aaKnown RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 PLOD1Q02809 727 aaPredicted RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 PTP4A2Q12974 167 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 PNOCQ13519 176 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 PTK6Q13882 451 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 CAPRIN1Q14444 709 aaKnown RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 SIX1Q15475 284 aaPredicted RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 MINDY4Q4G0A6 757 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 BOLA3Q53S33 107 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 KCTD11Q693B1 232 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TRILQ7L0X0 811 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.4□□□□□ -1.54
NCL-208ENST00000466274 LILRB2Q8N423 598 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TMEM156Q8N614 296 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 LILRA3Q8N6C8 439 aaPredicted RBP5.4□□□□□ -1.54
NCL-208ENST00000466274 C3orf56Q8N813 242 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 OR5AR1Q8NGP9 310 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 OR5K2Q8NHB8 316 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 MCOLN3Q8TDD5 553 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 NTNG2Q96CW9 530 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 SPATA13Q96N96 652 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TSGA13Q96PP4 275 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 NPAS2Q99743 824 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 STK33Q9BYT3 514 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 VN1R1Q9GZP7 353 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 ZDHHC11Q9H8X9 412 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 SIX2Q9NPC8 291 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 ETNK2Q9NVF9 386 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 HACD3Q9P035 362 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 KLHL20Q9Y2M5 609 aa5.4□□□□□ -1.54
NCL-208ENST00000466274 TGP01266 2768 aa5.4□□□□□ -1.55
NCL-208ENST00000466274 FAM166BA8MTA8 275 aa5.39□□□□□ -1.55
NCL-208ENST00000466274 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms