RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 EFCAB11Q9BUY7 163 aa14.41□□□□□ -0.1
HOXB3-204ENST00000465120 EHD1Q9H4M9 534 aa14.41□□□□□ -0.1
HOXB3-204ENST00000465120 TRIM45Q9H8W5 580 aaPredicted RBP14.41□□□□□ -0.1
HOXB3-204ENST00000465120 ZNF490Q9ULM2 529 aaPredicted RBP14.41□□□□□ -0.1
HOXB3-204ENST00000465120 MEMO1Q9Y316 297 aa14.41□□□□□ -0.1
HOXB3-204ENST00000465120 PEX1O43933 1283 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 SH3BGRLO75368 114 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 PCNAP12004 261 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 MSH2P43246 934 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 SSR4P51571 173 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 PLTPP55058 493 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 LIM2P55344 173 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 GPR85P60893 370 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 CHIT1Q13231 466 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 CDKL4Q5MAI5 379 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 GRTP1Q5TC63 336 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 ADNP2Q6IQ32 1131 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 ABHD17CQ6PCB6 329 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 NCCRP1Q6ZVX7 275 aaPredicted RBP14.4□□□□□ -0.1
HOXB3-204ENST00000465120 EID3Q8N140 333 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 PPM1NQ8N819 430 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 ALG9Q9H6U8 611 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 LIN28AQ9H9Z2 209 aaKnown RBP14.4□□□□□ -0.1
HOXB3-204ENST00000465120 ADAP2Q9NPF8 381 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 TIMMDC1Q9NPL8 285 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 KCMF1Q9P0J7 381 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 DAPP1Q9UN19 280 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 YARS2Q9Y2Z4 477 aaKnown RBP14.4□□□□□ -0.1
HOXB3-204ENST00000465120 UTP11Q9Y3A2 253 aaKnown RBP14.4□□□□□ -0.1
HOXB3-204ENST00000465120 SPACA6W5XKT8 324 aa14.4□□□□□ -0.1
HOXB3-204ENST00000465120 PCNX1Q96RV3 2341 aa14.4□□□□□ -0.11
HOXB3-204ENST00000465120 FAM159BA6NKW6 160 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 A8MVJ9 347 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 SUPT3HB4E1H0 165 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 TGFBR3LH3BV60 316 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 HS6ST1O60243 411 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CTNSO60931 367 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 SUPT3HO75486 399 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 WISP3O95389 354 aaPredicted RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CLDN14O95500 239 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 TPOP07202 933 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 GSTA2P09210 222 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 AGAP20933 346 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CASQ1P31415 396 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 PTGER1P34995 402 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 PTGS2P35354 604 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 KCNC1P48547 511 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CBLBQ13191 982 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 EFTUD2Q15029 972 aaKnown RBP eCLIP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ELAVL1Q15717 326 aaKnown RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 IL20RBQ6UXL0 311 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 C16orf47Q6ZP98 133 aaPredicted RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 GDF7Q7Z4P5 450 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 MDGA2Q7Z553 956 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 VN1R5Q7Z5H4 357 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 TBC1D1Q86TI0 1168 aaPredicted RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 DOLPP1Q86YN1 238 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 PDPRQ8NCN5 879 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 SRFBP1Q8NEF9 429 aaKnown RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ASB15Q8WXK1 588 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 DAZLQ92904 295 aaKnown RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 KIAA1191Q96A73 305 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 MTFMTQ96DP5 389 aaKnown RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 KCNC2Q96PR1 638 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CSF3RQ99062 836 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ALOXE3Q9BYJ1 711 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 CD244Q9BZW8 370 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ROGDIQ9GZN7 287 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 HPF1Q9NWY4 346 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 ZNF223Q9UK11 482 aaPredicted RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
HOXB3-204ENST00000465120 GTF3C1Q12789 2109 aa14.39□□□□□ -0.11
HOXB3-204ENST00000465120 A0A1B0GTH9 108 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 SYNDIG1LA6NDD5 238 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 WWP2O00308 870 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 CYR61O00622 381 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PRKNO60260 465 aaPredicted RBP14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PRAMEF4O60810 478 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 FAM155BO75949 473 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 OR2J2O76002 312 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PDE9AO76083 593 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 TBX6O95947 436 aaPredicted RBP14.38□□□□□ -0.11
HOXB3-204ENST00000465120 TFEBP19484 476 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PTGER4P35408 488 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 GMPRP36959 345 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 GPX6P59796 221 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PLGLB1Q02325 96 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 CAV1Q03135 178 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 AP5B1Q2VPB7 878 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 KBTBD12Q3ZCT8 623 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 PRAMEF9Q5VWM5 478 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 CHSY3Q70JA7 882 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 CYS1Q717R9 158 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 LRRC70Q7Z2Q7 622 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 CMC1Q7Z7K0 106 aa14.38□□□□□ -0.11
HOXB3-204ENST00000465120 ARMC10Q8N2F6 343 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms