RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 ABHD17CQ6PCB6 329 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF793Q6ZN11 406 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 CD163Q86VB7 1156 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 GPSM1Q86YR5 675 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 MARVELD2Q8N4S9 558 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 TMEM156Q8N614 296 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 TTLQ8NG68 377 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 MTFMTQ96DP5 389 aaKnown RBP13.5□□□□□ -0.25
ALMS1-202ENST00000464408 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 LURAP1Q96LR2 239 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 GPR22Q99680 433 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 RBBP8Q99708 897 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 NPLQ9BXD5 320 aaPredicted RBP13.5□□□□□ -0.25
ALMS1-202ENST00000464408 NT5DC2Q9H857 520 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 NSMCE4AQ9NXX6 385 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 GPRC5BQ9NZH0 403 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 GRHL1Q9NZI5 618 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 KCMF1Q9P0J7 381 aa13.5□□□□□ -0.25
ALMS1-202ENST00000464408 KLF13Q9Y2Y9 288 aaPredicted RBP13.5□□□□□ -0.25
ALMS1-202ENST00000464408 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 ANKDD1BA6NHY2 528 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 FAM159BA6NKW6 160 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 RTCAO00442 366 aaKnown RBP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 CLGNO14967 610 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 RAD51CO43502 376 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 CDC40O60508 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 STK16O75716 305 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 OR2J2O76002 312 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PDE9AO76083 593 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 OR6B1O95007 311 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 AGAP20933 346 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PTGER4P35408 488 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 KRTAP10-9P60411 292 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 ID2Q02363 134 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 C2orf54Q08AI8 447 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 DLG1Q12959 904 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 TRADDQ15628 312 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PDK4Q16654 411 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 GDF7Q7Z4P5 450 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 CMC1Q7Z7K0 106 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PDPRQ8NCN5 879 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 OR52N2Q8NGI0 321 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PTPMT1Q8WUK0 201 aaPredicted RBP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 WDR34Q96EX3 536 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 SERINC2Q96SA4 455 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 EHD1Q9H4M9 534 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 ADAP2Q9NPF8 381 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PRDM7Q9NQW5 492 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 CD274Q9NZQ7 290 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PTBP2Q9UKA9 531 aaKnown RBP13.49□□□□□ -0.25
ALMS1-202ENST00000464408 DAPP1Q9UN19 280 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 HCFC1P51610 2035 aa13.49□□□□□ -0.25
ALMS1-202ENST00000464408 PHF3Q92576 2039 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 E9PLN8 166 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 G3V3Y1 287 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 WWP2O00308 870 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 SAP18O00422 153 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 CLDN4O14493 209 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 CDK2AP1O14519 115 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 CCNT2O60583 730 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF354AO60765 605 aaPredicted RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 LDB3O75112 727 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 IFNA16P05015 189 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 TFEBP19484 476 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ELAVL4P26378 380 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 PAFAH1B1P43034 410 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 SSR4P51571 173 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 MTTPP55157 894 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 CHIT1Q13231 466 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 EFTUD2Q15029 972 aaKnown RBP eCLIP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 SULT1C3Q6IMI6 304 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ZNF595Q8IYB9 648 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 TCAIMQ8N3R3 496 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 RNF175Q8N4F7 328 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ZFP62Q8NB50 900 aaPredicted RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 POGLUT1Q8NBL1 392 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 PTCD3Q96EY7 689 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 TSPAN17Q96FV3 270 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 UBXN10Q96LJ8 280 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 CPNE1Q99829 537 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 VKORC1Q9BQB6 163 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 SORBS1Q9BX66 1292 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 RUBCNLQ9H714 662 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 COPS7BQ9H9Q2 264 aaPredicted RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 WHRNQ9P202 907 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 PPT2Q9UMR5 302 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 NCKAP5O14513 1909 aa13.48□□□□□ -0.25
ALMS1-202ENST00000464408 ANKRD17O75179 2603 aaKnown RBP13.48□□□□□ -0.25
ALMS1-202ENST00000464408 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
ALMS1-202ENST00000464408 PRRG2O14669 202 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms