RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 MS4A8Q9BY19 250 aa18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 VPS11Q9H270 941 aa18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 CDC42EP4Q9H3Q1 356 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 PRDM7Q9NQW5 492 aa18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 FBXW2Q9UKT8 454 aa18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 DAPP1Q9UN19 280 aa18.01■□□□□ 0.47
CCHCR1-210ENST00000464012 TRGV8A0A0C4DH27 118 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 A0A1B0GUH1 482 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 LRRC14BA6NHZ5 514 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 SAP18O00422 153 aaKnown RBP18■□□□□ 0.47
CCHCR1-210ENST00000464012 FCHO1O14526 889 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 SLC25A12O75746 678 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 IFNA16P05015 189 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 SP1P08047 785 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 MTHFD2P13995 350 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 EPB42P16452 691 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 TYK2P29597 1187 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 CASP2P42575 452 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 CLCN2P51788 898 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 ALDH6A1Q02252 535 aaKnown RBP18■□□□□ 0.47
CCHCR1-210ENST00000464012 SETDB1Q15047 1291 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 PFKFB4Q16877 469 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 ZNF787Q6DD87 383 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 ZNF595Q8IYB9 648 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 MMGT1Q8N4V1 131 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 FAM98AQ8NCA5 519 aaKnown RBP18■□□□□ 0.47
CCHCR1-210ENST00000464012 SREK1Q8WXA9 508 aaKnown RBP18■□□□□ 0.47
CCHCR1-210ENST00000464012 UBE2E3Q969T4 207 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 NCLNQ969V3 563 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 ACSS3Q9H6R3 686 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 CPSF2Q9P2I0 782 aaKnown RBP18■□□□□ 0.47
CCHCR1-210ENST00000464012 PCDHGB6Q9Y5F9 930 aa18■□□□□ 0.47
CCHCR1-210ENST00000464012 MYO7BQ6PIF6 2116 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 CYR61O00622 381 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 ALDOAP04075 364 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 SSR2P43308 183 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 CYB561P49447 251 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 E2F2Q14209 437 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 RCN2Q14257 317 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 GRHL2Q6ISB3 625 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 SLC25A25Q6KCM7 469 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 KLC3Q6P597 504 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 CEP128Q6ZU80 1094 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 CCDC91Q7Z6B0 441 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 UBE3DQ7Z6J8 389 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 LAS2Q8IYD9 372 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 OR7G3Q8NG95 312 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 RHEBL1Q8TAI7 183 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 VMP1Q96GC9 406 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 FRMD6Q96NE9 622 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 FMO2Q99518 471 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 MAPKAP1Q9BPZ7 522 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 ROGDIQ9GZN7 287 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 OR51B5Q9H339 312 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 ADAP2Q9NPF8 381 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 ZNF223Q9UK11 482 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 CLDN16Q9Y5I7 305 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 NAV2Q8IVL1 2488 aa17.99■□□□□ 0.47
CCHCR1-210ENST00000464012 KLHL2O95198 593 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 ATP5A1P25705 553 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 RBPJQ06330 500 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 ACAP2Q15057 778 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 TERF2Q15554 542 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 ZRSR2Q15696 482 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 ACOT4Q8N9L9 421 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 SRFBP1Q8NEF9 429 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 UHMK1Q8TAS1 419 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 TMEM125Q96AQ2 219 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 CCDC77Q9BR77 488 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 TBCDQ9BTW9 1192 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 SORBS1Q9BX66 1292 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 LYRM4Q9HD34 91 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 DOPEY1Q5JWR5 2465 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 MAST4O15021 2626 aa17.98■□□□□ 0.47
CCHCR1-210ENST00000464012 EML6Q6ZMW3 1958 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 NPIPA5E9PKD4 350 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 PRKNO60260 465 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 NME2P1O60361 137 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 LDB3O75112 727 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 ITGA10O75578 1167 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 INHBAP08476 426 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 CTAGE8P0CG41 777 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 NME2P22392 152 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 HIST1H1TP22492 207 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 SERPINB1P30740 379 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 DCTP40126 519 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 ARL1P40616 181 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 ALDH18A1P54886 795 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 ID2Q02363 134 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 STX4Q12846 297 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 ELAVL1Q15717 326 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 AP5B1Q2VPB7 878 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 TMEM35AQ53FP2 167 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 TECRLQ5HYJ1 363 aa17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 KHDRBS2Q5VWX1 349 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-210ENST00000464012 CHSY3Q70JA7 882 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms