RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ANAPC5Q9UJX4 755 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 TFR2Q9UP52 801 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 DUSP10Q9Y6W6 482 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 YLPM1P49750 1951 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 CTAGE15A4D2H0 777 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 TRIM64A6NGJ6 449 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 TUBAL3A6NHL2 446 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 G3V3Y1 287 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 H3BMM5 538 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 DVL2O14641 736 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 ARHGEF9O43307 516 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 B4GALT2O60909 372 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MFAP3LO75121 409 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 NDUFS3O75489 264 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MYO1DO94832 1006 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 TJP3O95049 919 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MPC1LP0DKB6 136 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 CNR1P21554 472 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 NMBRP28336 390 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 FMO4P31512 558 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MAN2A2P49641 1150 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PPP2R2BQ00005 443 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PLGLB1Q02325 96 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PWP1Q13610 501 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 TRIM14Q14142 442 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 CAPRIN1Q14444 709 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 OASLQ15646 514 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 ACSF3Q4G176 576 aaPredicted RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 DEFB134Q4QY38 66 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PCID2Q5JVF3 399 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 WLSQ5T9L3 541 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 STRA8Q7Z7C7 330 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 CTAGE6Q86UF2 777 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 FBXW8Q8N3Y1 598 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PRELID2Q8N945 189 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 ABHD11Q8NFV4 315 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 NT5CQ8TCD5 201 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 UTP15Q8TED0 518 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 NCLNQ969V3 563 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PDLIM2Q96JY6 352 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 SCYL1Q96KG9 808 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 WDR83Q9BRX9 315 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 ANP32EQ9BTT0 268 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 BDH2Q9BUT1 245 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 SGPP1Q9BX95 441 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 SPNS1Q9H2V7 528 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 LIN28AQ9H9Z2 209 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 CLK4Q9HAZ1 481 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 CCDC177Q9NQR7 707 aaPredicted RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 TUBA8Q9NY65 449 aaPredicted RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 KLHL42Q9P2K6 505 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MYOTQ9UBF9 498 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MTRF1LQ9UGC7 380 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 FBXW2Q9UKT8 454 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 ACAD8Q9UKU7 415 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 DRG1Q9Y295 367 aaKnown RBP7.11□□□□□ -1.27
SMC3-202ENST00000462899 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 MMACHCQ9Y4U1 282 aa7.11□□□□□ -1.27
SMC3-202ENST00000462899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.271e-8■■■■□ 23.2
SMC3-202ENST00000462899 TRGV5A0A0B4J1U4 118 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 TCRBV7S2A1N4TA0A589 114 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 LRRC3CA6NJW4 275 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 A8MUA0 341 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 NDUFS4O43181 175 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 CEP104O60308 925 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 EPPINO95925 133 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 MBD3O95983 291 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 RFPL3SP0C7P2 107 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 ZNF888P0CJ79 500 aaPredicted RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 CCL3P10147 92 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 CDH1P12830 882 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 OGNP20774 298 aaKnown RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 PPP2R1BP30154 601 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 FDFT1P37268 417 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 DNASE1L1P49184 302 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 HK2P52789 917 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 WNT3P56703 355 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 RWDD2BP57060 319 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 CRADDP78560 199 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 ZNF750Q32MQ0 723 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 RNF187Q5TA31 235 aaPredicted RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 THEMIS2Q5TEJ8 643 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 MEI1Q5TIA1 1274 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 NIPAL1Q6NVV3 410 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 LCTLQ6UWM7 567 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 IL20RBQ6UXL0 311 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 RTL4Q6ZR62 310 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 CENPUQ71F23 418 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 MAATS1Q7Z4T9 603 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 YTHDF3Q7Z739 585 aaKnown RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 LACC1Q8IV20 430 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 CA13Q8N1Q1 262 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 LRRC25Q8N386 305 aaPredicted RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 LRRC57Q8N9N7 239 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 TMEM52Q8NDY8 209 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 PPHLN1Q8NEY8 458 aaKnown RBP7.1□□□□□ -1.27
SMC3-202ENST00000462899 ASB15Q8WXK1 588 aa7.1□□□□□ -1.27
SMC3-202ENST00000462899 KIAA1191Q96A73 305 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms