RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 C10orf88Q9H8K7 445 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 LRRC40Q9H9A6 602 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 MMP25Q9NPA2 562 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 RASSF1Q9NS23 344 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 PIH1D1Q9NWS0 290 aaKnown RBP4.71□□□□□ -1.66
BRCA1-206ENST00000461574 HCN3Q9P1Z3 774 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 RUVBL2Q9Y230 463 aaKnown RBP4.71□□□□□ -1.66
BRCA1-206ENST00000461574 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-206ENST00000461574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.71□□□□□ -1.66
BRCA1-206ENST00000461574 L3MBTL1Q9Y468 752 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 ARHGAP21Q5T5U3 1957 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 CSPG4Q6UVK1 2322 aa4.71□□□□□ -1.66
BRCA1-206ENST00000461574 DNAJC13O75165 2243 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 hCG_1818297A0A087WSY0 165 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 A0A0U1RQJ8 604 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CCDC162PA2VCL2 907 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 OR2W5A6NFC9 320 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 A6NNC1 897 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 IQCF5A8MTL0 148 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 C22orf46C9J442 243 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 NPIPA2E9PIF3 369 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 NPIPA3F8WFD2 350 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 H0YIG0 161 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 APOC4-APOC2K7ER74 178 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 KPNA5O15131 536 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 P2RX6O15547 441 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FOXS1O43638 330 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 NSA2O95478 260 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 C1orf105O95561 183 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SYF2O95926 243 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 APOC2P02655 101 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 STATHP02808 62 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 THBDP07204 575 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 RBP3P10745 1247 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 IL1RNP18510 177 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 COMTP21964 271 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ACVR2AP27037 513 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FOXN2P32314 431 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 EFNA3P52797 238 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 OR4D2P58180 307 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SLC26A5P58743 744 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 EIF3EP60228 445 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 GPR85P60893 370 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FAM53BQ14153 422 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 GRB7Q14451 532 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 PCBP2Q15366 365 aaKnown RBP eCLIP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CCSMST1Q4G0I0 132 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FLYWCH1Q4VC44 716 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CCDC38Q502W7 563 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FASTKD1Q53R41 847 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CMPK2Q5EBM0 449 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 AARS2Q5JTZ9 985 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FBXO42Q6P3S6 717 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 B3GNT6Q6ZMB0 384 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 RBM43Q6ZSC3 357 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 MILR1Q7Z6M3 343 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 PRIMA1Q86XR5 153 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CDC20BQ86Y33 519 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CHERPQ8IWX8 916 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CYP4Z2PQ8N1L4 340 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 KIF2BQ8N4N8 673 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 TMEM156Q8N614 296 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 OR5M9Q8NGP3 310 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 OR6P1Q8NGX9 317 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 OR51Q1Q8NH59 317 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 HMGCLL1Q8TB92 370 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ZCCHC10Q8TBK6 192 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 LKAAEAR1Q8TD35 194 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CREB3L4Q8TEY5 395 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SMPDL3AQ92484 453 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 MBD6Q96DN6 1003 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SMC6Q96SB8 1091 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 NPAS2Q99743 824 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 EBNA1BP2Q99848 306 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SARGQ9BW04 601 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CARD6Q9BX69 1037 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 DEFB127Q9H1M4 99 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 EXO5Q9H790 373 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ARNT2Q9HBZ2 717 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ANKHQ9HCJ1 492 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 DMRT3Q9NQL9 472 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 PNPLA3Q9NST1 481 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ZNHIT6Q9NWK9 470 aaKnown RBP4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ALKBH4Q9NXW9 302 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 SPATA7Q9P0W8 599 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 TAC3Q9UHF0 121 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 CAPN11Q9UMQ6 739 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 KLK4Q9Y5K2 254 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 NFS1Q9Y697 457 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 ZNF407Q9C0G0 2248 aa4.7□□□□□ -1.66
BRCA1-206ENST00000461574 TLN2Q9Y4G6 2542 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 A0A1W2PPV9 198 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 ZNF839A8K0R7 811 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 FAM166BA8MTA8 275 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 FAM47E-STBD1D6RA91 191 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 E7EVH7 732 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 SGK494L7N484 410 aa4.69□□□□□ -1.66
BRCA1-206ENST00000461574 PRMT5O14744 637 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms