RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 OR52B6Q8NGF0 335 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 SUN3Q8TAQ9 357 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 NSUN5Q96P11 429 aaKnown RBP19.24■□□□□ 0.67
SCAF8-204ENST00000461219 NTMT1Q9BV86 223 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 ERVK-6Q9BXR3 956 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 SLC29A3Q9BZD2 475 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 CLMPQ9H6B4 373 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 LYRM4Q9HD34 91 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 PRDM7Q9NQW5 492 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 STMN3Q9NZ72 180 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 FBXW2Q9UKT8 454 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 PLAAQ9Y263 795 aa19.24■□□□□ 0.67
SCAF8-204ENST00000461219 BAHCC1Q9P281 2608 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 A0A1W2PPM1 405 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SYNDIG1LA6NDD5 238 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SORBS2O94875 1100 aaKnown RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 TBX6O95947 436 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 RPS17P08708 135 aaKnown RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 HIST1H1TP22492 207 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 ATP5F1P24539 256 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 TLX1P31314 330 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 TSFMP43897 325 aaKnown RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 NEK2P51955 445 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 CDH13P55290 713 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SLAMF1Q13291 335 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 ZNF169Q14929 603 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 INPP5JQ15735 1006 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SGO1Q5FBB7 561 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 B3GNTL1Q67FW5 361 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 CYP20A1Q6UW02 462 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SLC5A8Q8N695 610 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 ZNF354BQ96LW1 612 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SERPINI1Q99574 410 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 IQCGQ9H095 443 aaKnown RBP19.23■□□□□ 0.67
SCAF8-204ENST00000461219 NECTIN3Q9NQS3 549 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 PLA2G3Q9NZ20 509 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 TSC22D4Q9Y3Q8 395 aa19.23■□□□□ 0.67
SCAF8-204ENST00000461219 TCRBV16S1A1N1A0A5B0 115 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 COPEO14579 308 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 MYL2P10916 166 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 TSPAN8P19075 237 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 SLC26A5P58743 744 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 FOXK1P85037 733 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 C10orf62Q5T681 223 aaPredicted RBP19.22■□□□□ 0.67
SCAF8-204ENST00000461219 FRG2Q64ET8 278 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 EMBQ6PCB8 327 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 IGFL2Q6UWQ7 119 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 ZNF793Q6ZN11 406 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 Q6ZS92 163 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 RPS27LQ71UM5 84 aaKnown RBP19.22■□□□□ 0.67
SCAF8-204ENST00000461219 TDRPQ86YL5 185 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 OR4F6Q8NGB9 312 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 TRPC4APQ8TEL6 797 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 ZNF483Q8TF39 744 aaPredicted RBP19.22■□□□□ 0.67
SCAF8-204ENST00000461219 CCDC126Q96EE4 140 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 FRG2BQ96QU4 278 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 CSF3RQ99062 836 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 MAPKAP1Q9BPZ7 522 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 MMP25Q9NPA2 562 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 MS4A12Q9NXJ0 267 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 AHSPQ9NZD4 102 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 PHF11Q9UIL8 331 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 STK38LQ9Y2H1 464 aa19.22■□□□□ 0.67
SCAF8-204ENST00000461219 ARHGAP10A1A4S6 786 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 BLACEA4D250 179 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 SAGE2PA6NJ88 616 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 FOXE1O00358 373 aaPredicted RBP19.21■□□□□ 0.67
SCAF8-204ENST00000461219 DLX3O60479 287 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 MYO1DO94832 1006 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 F10P00742 488 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 TNNI3P19429 210 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 SOX11P35716 441 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 BUD31P41223 144 aaPredicted RBP19.21■□□□□ 0.67
SCAF8-204ENST00000461219 CLCQ05315 142 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 CUL3Q13618 768 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 MEP1AQ16819 746 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 FCRLBQ6BAA4 426 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 UBE3DQ7Z6J8 389 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 CISD2Q8N5K1 135 aaKnown RBP19.21■□□□□ 0.67
SCAF8-204ENST00000461219 Q8NA96 180 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 OR1N1Q8NGS0 311 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 PSMF1Q92530 271 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 SORBS1Q9BX66 1292 aaKnown RBP19.21■□□□□ 0.67
SCAF8-204ENST00000461219 WDR41Q9HAD4 459 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 ZBTB26Q9HCK0 441 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 GRID1Q9ULK0 1009 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 CSAG2Q9Y5P2 127 aa19.21■□□□□ 0.67
SCAF8-204ENST00000461219 COPG1Q9Y678 874 aaKnown RBP19.21■□□□□ 0.67
SCAF8-204ENST00000461219 PLPP1O14494 284 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 CTNSO60931 367 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 SBK3P0C264 359 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 ARFIP1P53367 373 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 TRAF3Q13114 568 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 RASA2Q15283 850 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 CCDC153Q494R4 210 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 GGTA1PQ4G0N0 100 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 ZNF678Q5SXM1 525 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 WDR93Q6P2C0 686 aa19.2■□□□□ 0.66
SCAF8-204ENST00000461219 CUZD1Q86UP6 607 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms