RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SETXQ7Z333 2677 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF860A6NHJ4 632 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CTIFO43310 598 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ALOX12BO75342 701 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ARFIP1P53367 373 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NAGLUP54802 743 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MTTPP55157 894 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PKNOX1P55347 436 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CUL3Q13618 768 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TLR1Q15399 786 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MINDY4Q4G0A6 757 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CRB2Q5IJ48 1285 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KHDRBS2Q5VWX1 349 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LIPMQ5VYY2 423 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FRG2Q64ET8 278 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GPRIN3Q6ZVF9 776 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MTFMTQ96DP5 389 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 QRFPRQ96P65 431 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FRG2BQ96QU4 278 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF382Q96SR6 550 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SERPINI1Q99574 410 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RIC8BQ9NVN3 520 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OXSMQ9NWU1 459 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NMRK1Q9NWW6 199 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AHSPQ9NZD4 102 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 C19orf25Q9UFG5 118 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRPS1Q9UHF7 1281 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PPT2Q9UMR5 302 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MRPS33Q9Y291 106 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SPACA6W5XKT8 324 aa12.47□□□□□ -0.41
RAB11FIP3-207ENST00000461009 BLACEA4D250 179 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MAGEB17A8MXT2 336 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MASP2O00187 686 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLDN4O14493 209 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRIM13O60858 407 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SPAG7O75391 227 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DDAH2O95865 285 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 B3GALT4O96024 378 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KRT6AP02538 564 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KRT6BP04259 564 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ENO1P06733 434 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FHP07954 510 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TSPAN8P19075 237 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HMOX2P30519 316 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SSR2P43308 183 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KRT6CP48668 564 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NEK2P51955 445 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RPS13P62277 151 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ARG2P78540 354 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LCP2Q13094 533 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MFAP5Q13361 173 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF169Q14929 603 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRR30Q53SZ7 412 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 B3GNTL1Q67FW5 361 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR4C11Q6IEV9 310 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ADNP2Q6IQ32 1131 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RIPOR1Q6ZS17 1223 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RPS27LQ71UM5 84 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ARMC2Q8NEN0 867 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR5T3Q8NGG3 340 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PGM2Q96G03 612 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AICDAQ9GZX7 198 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR51B5Q9H339 312 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DMRT3Q9NQL9 472 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRDM7Q9NQW5 492 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ASF1BQ9NVP2 202 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TEKT2Q9UIF3 430 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PCDHGA10Q9Y5H3 936 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ACTL7BQ9Y614 415 aa12.46□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NUP210LQ5VU65 1888 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PCSK5Q92824 1860 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 A0A0G2JN53 185 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ANKUB1A6NFN9 424 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PRMT3O60678 531 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ULK1O75385 1050 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 JRKO75564 520 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 OR4F21O95013 312 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ESRRBO95718 433 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SERPINA7P05543 415 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 C8orf89P0DMQ9 161 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 RAB38P57729 211 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 OLR1P78380 273 aa12.45□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ZNF33BQ06732 778 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms