RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SOX17Q9H6I2 414 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-209ENST00000460573 DDX31Q9H8H2 851 aaKnown RBP21.2■□□□□ 0.98
C9orf3-209ENST00000460573 TNFRSF12AQ9NP84 129 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 MED4Q9NPJ6 270 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 DAPP1Q9UN19 280 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 SPACA6W5XKT8 324 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 SCN3AQ9NY46 2000 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 RTCAO00442 366 aaKnown RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 SLC28A2O43868 658 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 UMODP07911 640 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 FHP07954 510 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 CERS1P27544 350 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 ARRB2P32121 409 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 BSGP35613 385 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 HTR6P50406 440 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 RAB38P57729 211 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 OLR1P78380 273 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 ERV3-1Q14264 604 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 THAP4Q8WY91 577 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 VPS50Q96JG6 964 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 CATSPER2Q96P56 530 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 CCT7Q99832 543 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 CRB3Q9BUF7 120 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 ZNF717Q9BY31 904 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 MRPL1Q9BYD6 325 aaKnown RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 ACPTQ9BZG2 426 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 ILKAPQ9H0C8 392 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 MANSC1Q9H8J5 431 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 LYARQ9NX58 379 aaKnown RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 MS4A12Q9NXJ0 267 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 C3orf18Q9UK00 162 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 MRPS33Q9Y291 106 aaKnown RBP21.19■□□□□ 0.98
C9orf3-209ENST00000460573 RAP2CQ9Y3L5 183 aa21.19■□□□□ 0.98
C9orf3-209ENST00000460573 J3QKU1 62 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 SLC28A1O00337 649 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 KLF11O14901 512 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 NKX2-8O15522 239 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 ITM2AO43736 263 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 DNAJB6O75190 326 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 HEXBP07686 556 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 FAM87AP0C7U9 286 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 MMP11P24347 488 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 SERPINB3P29508 390 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 EMP2P54851 167 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 LIM2P55344 173 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 BST1Q10588 318 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 CDC20Q12834 499 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 TBR1Q16650 682 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 IMPG1Q17R60 797 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 ADAMTS17Q8TE56 1095 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 CHTF18Q8WVB6 975 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 METTL2AQ96IZ6 378 aaKnown RBP21.18■□□□□ 0.98
C9orf3-209ENST00000460573 HBEGFQ99075 208 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 PFDN4Q9NQP4 134 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 THAP1Q9NVV9 213 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 ZDHHC2Q9UIJ5 367 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 MKL2Q9ULH7 1088 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 DNAJC15Q9Y5T4 150 aa21.18■□□□□ 0.98
C9orf3-209ENST00000460573 BLACEA4D250 179 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 CDC14CA4D256 554 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 IDSB3KWA1 339 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 CHN1P15882 459 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 NR1D1P20393 614 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 TBL3Q12788 808 aaKnown RBP21.17■□□□□ 0.98
C9orf3-209ENST00000460573 SLAMF1Q13291 335 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 IL10RAQ13651 578 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 LINC00303Q3SY05 128 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 UGT3A2Q3SY77 523 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 SPIN4Q56A73 249 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 CES4AQ5XG92 561 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 BORAQ6PGQ7 559 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 CYP20A1Q6UW02 462 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 SHISA6Q6ZSJ9 500 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 LAPTM4BQ86VI4 370 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 PRSS58Q8IYP2 241 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 PLPP5Q8NEB5 264 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 LANCL2Q9NS86 450 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 KCMF1Q9P0J7 381 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 PHF11Q9UIL8 331 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 HAO1Q9UJM8 370 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 POLHQ9Y253 713 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 FIS1Q9Y3D6 152 aa21.17■□□□□ 0.98
C9orf3-209ENST00000460573 A0A0A6YYD5 115 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 ARHGAP10A1A4S6 786 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 NPIPB8E9PQR5 432 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 CLDN4O14493 209 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 RGS14O43566 566 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 LYPLA1O75608 230 aaPredicted RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 RSL1D1O76021 490 aaKnown RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 PRKAR1AP10644 381 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 RPL14P50914 215 aaKnown RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 ACSM2AQ08AH3 577 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 MINDY4Q4G0A6 757 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 MFSD4BQ5TF39 518 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 FAM69BQ5VUD6 431 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 ACSM2BQ68CK6 577 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 MRM1Q6IN84 353 aaKnown RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 ATG14Q6ZNE5 492 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 COMMD6Q7Z4G1 85 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 ZNF595Q8IYB9 648 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms