RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 C1orf131Q8NDD1 294 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 PPHLN1Q8NEY8 458 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 MBD3L2Q8NHZ7 208 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 LINC01560Q8TB33 94 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF606Q8WXB4 792 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 SLCO2A1Q92959 643 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 DCLRE1CQ96SD1 692 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM167BQ9BTA0 163 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC25A32Q9H2D1 315 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 SRMSQ9H3Y6 488 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 CXorf56Q9H5V9 222 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 KIR3DX1Q9H7L2 352 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF696Q9H7X3 374 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 UBTD1Q9HAC8 227 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 MAGEF1Q9HAY2 307 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 ANKRD10Q9NXR5 420 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 IL1RAPL1Q9NZN1 696 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 KIF17Q9P2E2 1029 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 DNAJB11Q9UBS4 358 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC24A2Q9UI40 661 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 C3orf18Q9UK00 162 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 NDRG4Q9ULP0 352 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 PSMD13Q9UNM6 376 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 NEU3Q9UQ49 428 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 TRAF3IP3Q9Y228 551 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 CRYL1Q9Y2S2 319 aa3.75□□□□□ -1.81
ECHDC1-211ENST00000460558 NCKAP5O14513 1909 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 GXYLT2A0PJZ3 443 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ARHGAP42A6NI28 874 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 VSTM2BA6NLU5 285 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 HSPB2A8KAH6 182 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 GOLGA6L6A8MZA4 724 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 NPIPA2E9PIF3 369 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 NPIPA3F8WFD2 350 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM72CH0Y354 149 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 QSOX1O00391 747 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FCHO1O14526 889 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 BCKDKO14874 412 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 DSCR3O14972 297 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TCF21O43680 179 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 HS6ST1O60243 411 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 NME2P1O60361 137 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TMCC2O75069 709 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 WDR1O75083 606 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC25A12O75746 678 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PDE9AO76083 593 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 CDK14O94921 469 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PGLSO95336 258 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TK1P04183 234 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 EPB41P11171 864 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 KRT5P13647 590 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PAX1P15863 534 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 BMP5P22003 454 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 NDUFS1P28331 727 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 APOBEC3AP31941 199 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 HTR7P34969 479 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ALDH18A1P54886 795 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 MPP1Q00013 466 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 STK4Q13043 487 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FASTKQ14296 549 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PTPRRQ15256 657 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 HSPB2Q16082 182 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 MEP1AQ16819 746 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PDCD4Q53EL6 469 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 CMPK2Q5EBM0 449 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ARMC12Q5T9G4 340 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 RIPPLY2Q5TAB7 128 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PRR14LQ5THK1 2151 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM72AQ5TYM5 149 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM72DQ6L9T8 149 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF585AQ6P3V2 769 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 KDELC1Q6UW63 502 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TMEM108Q6UXF1 575 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 Q6ZRM9 215 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 MICALCLQ6ZW33 695 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 COX15Q7KZN9 410 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 OTOAQ7RTW8 1153 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 CLNKQ7Z7G1 428 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ADGRG6Q86SQ4 1221 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM72BQ86X60 149 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TRAPPC5Q8IUR0 188 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF547Q8IVP9 402 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PRSS58Q8IYP2 241 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 RFLNBQ8N5W9 214 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 IQUBQ8NA54 791 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 SYT8Q8NBV8 401 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 RELL2Q8NC24 303 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 OR4E2Q8NGC2 313 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 OR5M9Q8NGP3 310 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 OR6Y1Q8NGX8 325 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 CREB3L4Q8TEY5 395 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 TMEM171Q8WVE6 324 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 DHX58Q96C10 678 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 DACH2Q96NX9 599 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 KCNC2Q96PR1 638 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PSKH2Q96QS6 385 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms