RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 GNG2P59768 71 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 POLR2LP62875 67 aaKnown RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 NPRL3Q12980 569 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 NUMA1Q14980 2115 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ABRAXAS2Q15018 415 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SPANXN4Q5MJ08 99 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 UBTD2Q8WUN7 234 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ECHDC3Q96DC8 303 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 LINGO1Q96FE5 620 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 LOXL4Q96JB6 756 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 COL21A1Q96P44 957 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 EPYCQ99645 322 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 COPS4Q9BT78 406 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 C6orf62Q9GZU0 229 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 C6orf106Q9H6K1 298 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 KRT84Q9NSB2 600 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 EHD3Q9NZN3 535 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TSPAN11A1L157 253 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 HMX3A6NHT5 357 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 PCDHGA12O60330 932 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 PGLSO95336 258 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 ITGA2P17301 1181 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 ALOX12P18054 663 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 PTGER3P43115 390 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 NKX2-5P52952 324 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-203ENST00000460097 ZFP69Q49AA0 526 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 GCNT7Q6ZNI0 430 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 GALNT5Q7Z7M9 940 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 HORMAD1Q86X24 394 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 CCDC71Q8IV32 467 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-203ENST00000460097 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 Q8N9G6 341 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-203ENST00000460097 TESCQ96BS2 214 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 HSPA12BQ96MM6 686 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 OR52E6Q96RD3 313 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 TRAF4Q9BUZ4 470 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-203ENST00000460097 SPATA9Q9BWV2 254 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 SLC29A3Q9BZD2 475 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 SERHLQ9NQF3 203 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 ASB1Q9Y576 335 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 PCDHB9Q9Y5E1 797 aa15.1■□□□□ 0.01
CMTM3-203ENST00000460097 THADAQ6YHU6 1953 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 PRR23AA6NEV1 266 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 CLCA1A8K7I4 914 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 A8MVJ9 347 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 H7C0S8 307 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 NDUFB5O43674 189 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 FABP3P05413 133 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 PTPN6P29350 595 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 SLC15A1P46059 708 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 CLDN8P56748 225 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 RPL38P63173 70 aaKnown RBP15.09■□□□□ 0.01
CMTM3-203ENST00000460097 RPP38P78345 283 aaKnown RBP15.09■□□□□ 0.01
CMTM3-203ENST00000460097 BNC1Q01954 994 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 DMPKQ09013 629 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 IRF3Q14653 427 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 ARMC12Q5T9G4 340 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 LYSMD4Q5XG99 296 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 KIAA0895LQ68EN5 471 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 NEK5Q6P3R8 708 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 AHSA2Q719I0 299 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 ARMCX6Q7L4S7 300 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 ZNF367Q7RTV3 350 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 MILR1Q7Z6M3 343 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 ZSWIM9Q86XI8 627 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 LIX1LQ8IVB5 337 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 P3H2Q8IVL5 708 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 DNAJC22Q8N4W6 341 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 PNMA8BQ9ULN7 279 aaPredicted RBP15.09■□□□□ 0.01
CMTM3-203ENST00000460097 U3KQV3 271 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 SPAG17Q6Q759 2223 aa15.09■□□□□ 0.01
CMTM3-203ENST00000460097 SLC35F4A4IF30 521 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 NCF1BA6NI72 391 aaPredicted RBP15.08■□□□□ 0.01
CMTM3-203ENST00000460097 C2orf81A6NN90 581 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 NCF1CA8MVU1 366 aaPredicted RBP15.08■□□□□ 0.01
CMTM3-203ENST00000460097 UPK3BL1B0FP48 263 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 UPK3BL2E5RIL1 263 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PCDH8O95206 1070 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 C9P02748 559 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PRPS2P11908 318 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PRPH2P23942 346 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PTX3P26022 381 aaPredicted RBP15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PTGR1Q14914 329 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 WDR45BQ5MNZ6 344 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 CTSL3PQ5NE16 218 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 EIF3MQ7L2H7 374 aaKnown RBP15.08■□□□□ 0.01
CMTM3-203ENST00000460097 RGL4Q8IZJ4 473 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 EEF1AKMT1Q8WVE0 214 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 USP7Q93009 1102 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 ST6GAL2Q96JF0 529 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 NTMT1Q9BV86 223 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 LRTM1Q9HBL6 345 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 DIABLOQ9NR28 239 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 PDP1Q9P0J1 537 aaPredicted RBP15.08■□□□□ 0.01
CMTM3-203ENST00000460097 SPASTQ9UBP0 616 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 BTBD3Q9Y2F9 522 aa15.08■□□□□ 0.01
CMTM3-203ENST00000460097 CARD8Q9Y2G2 431 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms