RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GALNT16Q8N428 558 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 TTC29Q8NA56 475 aaPredicted RBP14.74□□□□□ -0.05
SDF4-204ENST00000459994 HUS1BQ8NHY5 278 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
SDF4-204ENST00000459994 TWIST2Q8WVJ9 160 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 SELENOMQ8WWX9 145 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 FKBP10Q96AY3 582 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 TM4SF19Q96DZ7 209 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 C17orf62Q9BQA9 187 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 FGFR1OP2Q9NVK5 253 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 CSAG2Q9Y5P2 127 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 HS3ST3B1Q9Y662 390 aa14.74□□□□□ -0.05
SDF4-204ENST00000459994 PDYNP01213 254 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 PCNAP12004 261 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 ALOX15P16050 662 aaPredicted RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 GNLYP22749 145 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 HTR6P50406 440 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 EFNA3P52797 238 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 RRADP55042 308 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 PWP1Q13610 501 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 PRTGQ2VWP7 1150 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 ASPGQ86U10 573 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 PRSS58Q8IYP2 241 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 ARHGEF39Q8N4T4 335 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 GBP7Q8N8V2 638 aaPredicted RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 CAMKVQ8NCB2 501 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 CREB3L4Q8TEY5 395 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 RERGQ96A58 199 aaPredicted RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 SLC26A1Q9H2B4 701 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 TUBB1Q9H4B7 451 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 BRF2Q9HAW0 419 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 MARCOQ9UEW3 520 aaPredicted RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 FBXL4Q9UKA2 621 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 RUVBL1Q9Y265 456 aaKnown RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 MRPS2Q9Y399 296 aaKnown RBP14.73□□□□□ -0.05
SDF4-204ENST00000459994 FIS1Q9Y3D6 152 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 MAP4K5Q9Y4K4 846 aa14.73□□□□□ -0.05
SDF4-204ENST00000459994 VSTM2BA6NLU5 285 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 TRPC5OSA6NMA1 111 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 SLC28A1O00337 649 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 TXNDC9O14530 226 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 ZNF195O14628 629 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 SERPINA6P08185 405 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 KITP10721 976 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 MMP11P24347 488 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 PTX3P26022 381 aaPredicted RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 NEK2P51955 445 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 SEC24CP53992 1094 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 Q0VFX4 171 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 CSTF3Q12996 717 aaKnown RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 ABRAXAS2Q15018 415 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 PLEKHN1Q494U1 663 aaPredicted RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 SGO1Q5FBB7 561 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 VWA2Q5GFL6 755 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 FAM219BQ5XKK7 198 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 ADNP2Q6IQ32 1131 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 KIRREL2Q6UWL6 708 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 LAPTM4BQ86VI4 370 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 NT5CQ8TCD5 201 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 SLC13A3Q8WWT9 602 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 STON2Q8WXE9 905 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 CCT6BQ92526 530 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 C19orf60Q96EN9 201 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 CMTM7Q96FZ5 175 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 MTERF1Q99551 399 aaKnown RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 SIKE1Q9BRV8 207 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 WDR54Q9H977 334 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 DMRT3Q9NQL9 472 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 FARSBQ9NSD9 589 aaKnown RBP14.72□□□□□ -0.05
SDF4-204ENST00000459994 USH1CQ9Y6N9 552 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 ESPL1Q14674 2120 aa14.72□□□□□ -0.05
SDF4-204ENST00000459994 MAGEB17A8MXT2 336 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 PEX12O00623 359 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 PIP5K1BO14986 540 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 DPM1O60762 260 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 TBX6O95947 436 aaPredicted RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 ALBP02768 609 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 SLC35G6P0C7Q6 338 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 TROVE2P10155 538 aaKnown RBP eCLIP14.71□□□□□ -0.05
SDF4-204ENST00000459994 DRD4P21917 467 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 RPS13P62277 151 aaKnown RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 BTKQ06187 659 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 KLC1Q07866 573 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 CUL3Q13618 768 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 DDX39BQ13838 428 aaKnown RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 MYBPC3Q14896 1274 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 INPP5JQ15735 1006 aaPredicted RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 SYT16Q17RD7 645 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 ADPRMQ3LIE5 342 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 XKR7Q5GH72 579 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 DEPDC1Q5TB30 811 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 VWA5B1Q5TIE3 1220 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 YOD1Q5VVQ6 348 aaPredicted RBP14.71□□□□□ -0.05
SDF4-204ENST00000459994 CLEC1AQ8NC01 280 aa14.71□□□□□ -0.05
SDF4-204ENST00000459994 STT3BQ8TCJ2 826 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms