RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 HSPA7P48741 367 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 S100A10P60903 97 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 IL10RBQ08334 325 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ARL9Q6T311 187 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 KREMEN2Q8NCW0 462 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 OR4K2Q8NGD2 314 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NEIL3Q8TAT5 605 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 DENND1AQ8TEH3 1009 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 HSH2DQ96JZ2 352 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 ALPK1Q96QP1 1244 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 EFCAB11Q9BUY7 163 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 NIPAL2Q9H841 368 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 DZANK1Q9NVP4 752 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 EIF2B4Q9UI10 523 aaKnown RBP9.41□□□□□ -0.9
UFD1-205ENST00000459854 ZDHHC2Q9UIJ5 367 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 MAFFQ9ULX9 164 aa9.41□□□□□ -0.9
UFD1-205ENST00000459854 A8MV72 311 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 ZNF705EA8MWA4 302 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 DLX3O60479 287 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 VNN1O95497 513 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 VAMP1P23763 118 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 IGFALSP35858 605 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 FNTBP49356 437 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 PFKPQ01813 784 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 PMS2P3Q13401 168 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 KEAP1Q14145 624 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ESCO2Q56NI9 601 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ATAT1Q5SQI0 421 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 SHKBP1Q8TBC3 707 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 SETD7Q8WTS6 366 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 DNASE1L2Q92874 299 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 RIPOR3Q96MK2 946 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 CDCA3Q99618 268 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 TMED9Q9BVK6 235 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 TRBC2A0A5B9 178 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 WNT9AO14904 365 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 MYCLP1P12525 358 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 ZNF20P17024 532 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ARFRP1Q13795 201 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 TMEM198Q66K66 360 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ZNF529Q6P280 563 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MBOAT1Q6ZNC8 495 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ATP6V1C2Q8NEY4 427 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ZNF599Q96NL3 588 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 SECISBP2Q96T21 854 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 CACNG6Q9BXT2 260 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 KCNH6Q9H252 994 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 SYT4Q9H2B2 425 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MEAF6Q9HAF1 191 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MS4A12Q9NXJ0 267 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 CXXC1Q9P0U4 656 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 FZD10Q9ULW2 581 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 BACE2Q9Y5Z0 518 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 A0A1W2PRB8 838 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 EEDO75530 441 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 UBBP0CG47 229 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 UBCP0CG48 685 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 FGF3P11487 239 aaPredicted RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 DGKQP52824 942 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 RPS27AP62979 156 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 UBA52P62987 128 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 SOWAHAQ2M3V2 549 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 TRMT10BQ6PF06 316 aaKnown RBP9.4□□□□□ -0.9
UFD1-205ENST00000459854 AQP11Q8NBQ7 271 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 OR2L8Q8NGY9 312 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MYRFLQ96LU7 910 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ZNF597Q96LX8 424 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 MAGEH1Q9H213 219 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 OR51V1Q9H2C8 321 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 POLE4Q9NR33 117 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 C19orf12Q9NSK7 152 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 SMOXQ9NWM0 555 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 PPP4R1LQ9P1A2 415 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 ERVK-18Q9QC07 812 aa9.4□□□□□ -0.9
UFD1-205ENST00000459854 A0A096LPI6 279 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 ELOA3DA6NLF2 546 aaPredicted RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 RGS9O75916 674 aaPredicted RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 ATE1O95260 518 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 CTSAP10619 480 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 TYRP14679 529 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 OPRL1P41146 370 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 PRKXP51817 358 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 CLDN10P78369 228 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 SOX4Q06945 474 aaPredicted RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 DUSP4Q13115 394 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 GNMTQ14749 295 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 ELOA3BQ3SY89 546 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 GPR33Q49SQ1 333 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 SCGB2B2Q4G0G5 96 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 DCAF12L1Q5VU92 463 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms