RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 VPS4AQ9UN37 437 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 PCDHGB4Q9UN71 923 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 GMEB1Q9Y692 573 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 EIF2S1P05198 315 aaKnown RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 ATXN3P54252 364 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 VSX2P58304 361 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 AP2B1P63010 937 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 NKAIN2Q5VXU1 208 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 LCN8Q6JVE9 175 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 DGLUCYQ7Z3D6 616 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 AURKBQ96GD4 344 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 ZNF583Q96ND8 569 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 KAT8Q9H7Z6 458 aaKnown RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 NKX1-2Q9UD57 310 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 ERVK-11Q9UQG0 969 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 PCDHB3Q9Y5E6 796 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 SNX13Q9Y5W8 968 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 NUP214P35658 2090 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 C1orf226A1L170 272 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 PATE3B3GLJ2 98 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 TXNDC9O14530 226 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 PDPK1O15530 556 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 KIF1CO43896 1103 aaKnown RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 SRPX2O60687 465 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 PNLIPP16233 465 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 ALOX12P18054 663 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 NR0B2Q15466 257 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 PLXDC1Q8IUK5 500 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 MCATQ8IVS2 390 aaKnown RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 LRGUKQ96M69 825 aa23.16■■□□□ 1.3
U2AF1-204ENST00000459639 STX18Q9P2W9 335 aaKnown RBP23.16■■□□□ 1.3
U2AF1-204ENST00000459639 A0A1W2PRB8 838 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 EVPLLA8MZ36 301 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 ARHGAP33O14559 1287 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 B4GAT1O43505 415 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 C6orf47O95873 294 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 SYPP08247 313 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 PPIBP23284 216 aaKnown RBP23.15■■□□□ 1.3
U2AF1-204ENST00000459639 MLLT3P42568 568 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-204ENST00000459639 FRKP42685 505 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-204ENST00000459639 HBA1P69905 142 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 FAM181AQ8N9Y4 354 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 TNIP2Q8NFZ5 429 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 OR10A6Q8NH74 314 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 EGFL7Q9UHF1 273 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 PHF11Q9UIL8 331 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 FBXW2Q9UKT8 454 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 ATG4BQ9Y4P1 393 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 SLC22A7Q9Y694 548 aa23.15■■□□□ 1.3
U2AF1-204ENST00000459639 MN1Q10571 1320 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-204ENST00000459639 SCN3AQ9NY46 2000 aa23.14■■□□□ 1.3
U2AF1-204ENST00000459639 A0A1W2PR48 441 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 FAM220BPB1ANY3 271 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 CLIC1O00299 241 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 ARPC2O15144 300 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 B3GALT2O43825 422 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 C9P02748 559 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 C8BP07358 591 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 ENGP17813 658 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 DEFB110Q30KQ9 67 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 AASDHQ4L235 1098 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-204ENST00000459639 DEFB134Q4QY38 66 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 ZFP1Q6P2D0 407 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 GPR155Q7Z3F1 870 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 PACS2Q86VP3 889 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 SPATA24Q86W54 205 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 CALHM3Q86XJ0 350 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 TRIML2Q8N7C3 387 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 OR2T12Q8NG77 320 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 PYDC1Q8WXC3 89 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 CCDC74AQ96AQ1 378 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 TAS2R9Q9NYW1 312 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 MAGEL2Q9UJ55 1249 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 CORO2BQ9UQ03 480 aa23.14■■□□□ 1.29
U2AF1-204ENST00000459639 IGHV5-51A0A0C4DH38 117 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 AQP12BA6NM10 295 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PROM1O43490 865 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 HCRTR1O43613 425 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ZBTB11O95625 1053 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 AIFM1O95831 613 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 MYF5P13349 255 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ATP6V1B2P21281 511 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 GABRA4P48169 554 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PCBP4P57723 403 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 OR4D2P58180 307 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ABHD18Q0P651 414 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 GAB1Q13480 694 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 SPRED1Q7Z699 444 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PROSER1Q86XN7 944 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 AQP12AQ8IXF9 295 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 EXOSC8Q96B26 276 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 FAM120BQ96EK7 910 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 RSRC1Q96IZ7 334 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 LOXL4Q96JB6 756 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 MAPKAP1Q9BPZ7 522 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ZMYND15Q9H091 742 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 TPT1P8Q9HAU6 139 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PDE7BQ9NP56 450 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 SOHLH2Q9NX45 425 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PLCL2Q9UPR0 1127 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms