RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LZICQ8WZA0 190 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 NCLNQ969V3 563 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 EXOSC8Q96B26 276 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 MVB12AQ96EY5 273 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR2A5Q96R48 311 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 CGREF1Q99674 301 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PELOQ9BRX2 385 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPATA9Q9BWV2 254 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC6A16Q9GZN6 736 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 CHRNA10Q9GZZ6 450 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 VCXQ9H320 206 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 RPF2Q9H7B2 306 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 LYRM4Q9HD34 91 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FGF21Q9NSA1 209 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ATP6V1HQ9UI12 483 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 BTNL2Q9UIR0 455 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ANGPTL2Q9UKU9 493 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PNMA8BQ9ULN7 279 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAF1Q9UNN5 650 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SH2B3Q9UQQ2 575 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 NAALAD2Q9Y3Q0 740 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 HCN4Q9Y3Q4 1203 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCL27Q9Y4X3 112 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLK4Q9Y5K2 254 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLCO1B1Q9Y6L6 691 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 NUP214P35658 2090 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 CACNA1EQ15878 2313 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 KNL1Q8NG31 2342 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 KMT2EQ8IZD2 1858 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CABIN1Q9Y6J0 2220 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A0G2JN53 185 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PATE3B3GLJ2 98 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ANKRD65E5RJM6 399 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 H0YIG0 161 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CLIC1O00299 241 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 POLR1CO15160 346 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRAMEF4O60810 478 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 BCAS2O75934 225 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PDE9AO76083 593 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 AGR2O95994 175 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 C9P02748 559 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 IFNA16P05015 189 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 FURINP09958 794 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCNYL3P0C7X3 344 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 JMJD7P0C870 316 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZCCHC18P0CG32 403 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 T-ENOLP0DO92 83 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 NELFEP18615 380 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 UQCRC2P22695 453 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC6A2P23975 617 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PSMA4P25789 261 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CD1CP29017 333 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 TPP2P29144 1249 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PEBP1P30086 187 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 HNRNPH1P31943 449 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 IFNA8P32881 189 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 BSGP35613 385 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CRATP43155 626 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 MAGEA8P43361 318 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 NCBP2P52298 156 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ARHGDIAP52565 204 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 DGKQP52824 942 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 RAB38P57729 211 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 C21orf58P58505 322 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCL7P80098 99 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 HPCAP84074 193 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ABHD18Q0P651 414 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPEM2Q0P670 501 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 FADDQ13158 208 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SQSTM1Q13501 440 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SERTAD2Q14140 314 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRIM25Q14258 630 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 IL11RAQ14626 422 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 NR1D2Q14995 579 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZIC1Q15915 447 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SNCBQ16143 134 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CSRP2Q16527 193 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ADPRMQ3LIE5 342 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 MTX3Q5HYI7 312 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRAMEF9Q5VWM5 478 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 NANOGP8Q6NSW7 305 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZFP1Q6P2D0 407 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 GUSBP11Q6P575 273 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC2A7Q6PXP3 512 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 XKR5Q6UX68 686 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ATG14Q6ZNE5 492 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 RBM44Q6ZP01 1051 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 TTLL10Q6ZVT0 673 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ASRGL1Q7L266 308 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CAMKMTQ7Z624 323 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPATA24Q86W54 205 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM20CQ8IXL6 584 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRRC25Q8N386 305 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 RNF175Q8N4F7 328 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 DNAJC22Q8N4W6 341 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 DPP10Q8N608 796 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 KRTCAP2Q8N6L1 136 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 KCT2Q8NC54 265 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR2T12Q8NG77 320 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR7A2PQ8NGA2 310 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms