RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CCNG1P51959 295 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 BTG2P78543 158 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 DDX39BQ13838 428 aaKnown RBP16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 RUNX2Q13950 521 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 NR6A1Q15406 480 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 KHDRBS2Q5VWX1 349 aaKnown RBP16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 H3F3CQ6NXT2 135 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 GOLGA7Q7Z5G4 137 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 PLD6Q8N2A8 252 aaKnown RBP16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 RGMAQ96B86 450 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 AICDAQ9GZX7 198 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 MS4A12Q9NXJ0 267 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 PLA2G3Q9NZ20 509 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 ICE1Q9Y2F5 2266 aa16.43■□□□□ 0.22
SCARNA2-201ENST00000458748 FAM227AF5H4B4 570 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 TGFB1P01137 390 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 SSR2P43308 183 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 LIM2P55344 173 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 SLC29A2Q14542 456 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 DEPDC1Q5TB30 811 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 TIFABQ6ZNK6 161 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 SHISA5Q8N114 240 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 BCORP1Q8N888 145 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 ACOT4Q8N9L9 421 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 CATSPER1Q8NEC5 780 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 HUS1BQ8NHY5 278 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 UTP23Q9BRU9 249 aaKnown RBP16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 L2HGDHQ9H9P8 463 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 PPCSQ9HAB8 311 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 PRDM7Q9NQW5 492 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 NTNG1Q9Y2I2 539 aa16.42■□□□□ 0.22
SCARNA2-201ENST00000458748 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 E2F3O00716 465 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 CTNSO60931 367 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 TBX6O95947 436 aaPredicted RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 CRYABP02511 175 aaKnown RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 HIST1H1TP22492 207 aaPredicted RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 TLX1P31314 330 aaPredicted RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 STX4Q12846 297 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 BIKQ13323 160 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 MRPL49Q13405 166 aaKnown RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 SERTAD2Q14140 314 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 CPSF6Q16630 551 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 HIST2H2BCQ6DN03 193 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 OR4C11Q6IEV9 310 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ADNP2Q6IQ32 1131 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 SCUBE1Q8IWY4 988 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 TMEM132CQ8N3T6 1108 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 L3MBTL4Q8NA19 623 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 FAM47BQ8NA70 645 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ST6GALNAC3Q8NDV1 305 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ACMSDQ8TDX5 336 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ELP5Q8TE02 316 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ADAP2Q9NPF8 381 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 DMRT3Q9NQL9 472 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 NECTIN3Q9NQS3 549 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 PNO1Q9NRX1 252 aaKnown RBP16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 ZNF358Q9NW07 568 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 PSD3Q9NYI0 1048 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 PHF11Q9UIL8 331 aa16.41■□□□□ 0.22
SCARNA2-201ENST00000458748 FOXE1O00358 373 aaPredicted RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 FCHO1O14526 889 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 PRAMEF2O60811 474 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 SEMA7AO75326 666 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 SCELO95171 688 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 SIX3O95343 332 aaPredicted RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 IFNA16P05015 189 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 EDN3P14138 238 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 CD46P15529 392 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 ATP5A1P25705 553 aaKnown RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 PPP2R1BP30154 601 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 CLCN2P51788 898 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 IFT88Q13099 833 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 CUL3Q13618 768 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 EIF2S3LQ2VIR3 472 aaKnown RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 TEX35Q5T0J7 233 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 TTC19Q6DKK2 380 aaPredicted RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 RPS19BP1Q86WX3 136 aaKnown RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 CRLF3Q8IUI8 442 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 BEST3Q8N1M1 668 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 B3GNT7Q8NFL0 401 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 PRR7Q8TB68 274 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 GRHL3Q8TE85 626 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 DAZLQ92904 295 aaKnown RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 C5orf34Q96MH7 638 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 MTERF1Q99551 399 aaKnown RBP16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 NTMT1Q9BV86 223 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 DEFB126Q9BYW3 111 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 OLAHQ9NV23 265 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 PCDHGB6Q9Y5F9 930 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 CLCA3PQ9Y6N3 262 aa16.4■□□□□ 0.22
SCARNA2-201ENST00000458748 A8MUA0 341 aa16.39■□□□□ 0.21
SCARNA2-201ENST00000458748 CYR61O00622 381 aa16.39■□□□□ 0.21
SCARNA2-201ENST00000458748 DYRK3O43781 588 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms