RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SUPT3HO75486 399 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 WISP2O76076 250 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 WISP3O95389 354 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 NADKO95544 446 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 IFNA16P05015 189 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 KIR3DL1P43629 444 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 HLCSP50747 726 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 MTTPP55157 894 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 IRF8Q02556 426 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 RUNX2Q13950 521 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 DOC2AQ14183 400 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 ADNP2Q6IQ32 1131 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 TBC1D1Q86TI0 1168 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 CPSF7Q8N684 471 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 NFAM1Q8NET5 270 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF592Q92610 1267 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 NCLNQ969V3 563 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 VMP1Q96GC9 406 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 SERINC2Q96SA4 455 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 EFCAB11Q9BUY7 163 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 EHD1Q9H4M9 534 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 ALG9Q9H6U8 611 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 NT5DC2Q9H857 520 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 GRHL1Q9NZI5 618 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 CDK2AP1O14519 115 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 TFECO14948 347 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 GSTA2P09210 222 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 PCNAP12004 261 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 PPP2R1BP30154 601 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 STX2P32856 288 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 MSH2P43246 934 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 HNRNPFP52597 415 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 HSD17B7P56937 341 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CAV1Q03135 178 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 TLE4Q04727 773 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CHIT1Q13231 466 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 LAPTM5Q13571 262 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 BMPR2Q13873 1038 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 TERF2Q15554 542 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 ZKSCAN8Q15776 578 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 KRTAP21-3Q3LHN1 58 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 KBTBD12Q3ZCT8 623 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CDKL4Q5MAI5 379 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 GRTP1Q5TC63 336 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 LRRC70Q7Z2Q7 622 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CMC1Q7Z7K0 106 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 SPPL2CQ8IUH8 684 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF595Q8IYB9 648 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CYP4Z2PQ8N1L4 340 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 GHDCQ8N2G8 530 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 PDPRQ8NCN5 879 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 CHTF18Q8WVB6 975 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 SREK1Q8WXA9 508 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 KIAA1191Q96A73 305 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 ADAP2Q9NPF8 381 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 NUDT4Q9NZJ9 180 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 ERVK-11Q9UQG0 969 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 KLF13Q9Y2Y9 288 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 SPACA6W5XKT8 324 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 PCNX1Q96RV3 2341 aa14.69□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNHIT1O43257 154 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 ASNA1O43681 348 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 SH3BGRLO75368 114 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 ITGA10O75578 1167 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 FAM155BO75949 473 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 TFEBP19484 476 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 TRHRP34981 398 aaPredicted RBP14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 GGT5P36269 586 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 GMPRP36959 345 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 MAGEA4P43358 317 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 KCNC1P48547 511 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 MEOX1P50221 254 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 SMSP52788 366 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 LIM2P55344 173 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 GPX6P59796 221 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 HSF1Q00613 529 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 STX4Q12846 297 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 CBLBQ13191 982 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 ABHD17CQ6PCB6 329 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 SPNS3Q6ZMD2 512 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 VN1R5Q7Z5H4 357 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 APCDD1LQ8NCL9 501 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 TMEM52Q8NDY8 209 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 STAG3L4Q8TBR4 150 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 FBF1Q8TES7 1133 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 MTFMTQ96DP5 389 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 MRRFQ96E11 262 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 QRFPRQ96P65 431 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 KCNC2Q96PR1 638 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 F2RL3Q96RI0 385 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 CSF3RQ99062 836 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 CD244Q9BZW8 370 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 ROGDIQ9GZN7 287 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 NMRAL1Q9HBL8 299 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 OPTCQ9UBM4 332 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 CLCA3PQ9Y6N3 262 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 DNHD1Q96M86 4753 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 GTF3C1Q12789 2109 aa14.68□□□□□ -0.06
CHCHD3-204ENST00000457942 MYOCOSA0A1B0GUC4 107 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms