RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FAM58BPP0C7Q3 252 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ALPPL2P10696 532 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CD59P13987 128 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 TCN1P20061 433 aaPredicted RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 PRPS1L1P21108 318 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 HRH2P25021 359 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MAPK1P28482 360 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 S100A3P33764 101 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 HOXD12P35452 270 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 GSK3BP49841 420 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CDK9P50750 372 aaKnown RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 MVDP53602 400 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MAPK12P53778 367 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 EPHA4P54764 986 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MTTPP55157 894 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MAT1AQ00266 395 aaKnown RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 ID2Q02363 134 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 STX5Q13190 355 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SLAMF1Q13291 335 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ART3Q13508 389 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PWP1Q13610 501 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 NR0B2Q15466 257 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MAPRE2Q15555 327 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 MMEL1Q495T6 779 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 DNAL1Q4LDG9 190 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 RUNDC3AQ59EK9 446 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 WASHC2DQ5SRD0 308 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 LRIF1Q5T3J3 769 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 NANOGP8Q6NSW7 305 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ARMC6Q6NXE6 501 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CAMKMTQ7Z624 323 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 NUDT13Q86X67 352 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 FAM47BQ8NA70 645 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SIMC1Q8NDZ2 872 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 OR9A4Q8NGU2 314 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 OR1L3Q8NH93 324 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 TSPEARQ8WU66 669 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PMEPA1Q969W9 287 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 GAL3ST3Q96A11 431 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ZUFSPQ96AP4 578 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 EXOSC8Q96B26 276 aaKnown RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 SLC22A18Q96BI1 424 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CGREF1Q99674 301 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CCDC3Q9BQI4 270 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 LRFN3Q9BTN0 628 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 TUBB6Q9BUF5 446 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 DUSP26Q9BV47 211 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SERHL2Q9H4I8 314 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PIF1Q9H611 641 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 REEP4Q9H6H4 257 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CXorf36Q9H7Y0 433 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ANKRA2Q9H9E1 313 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 NANOGQ9H9S0 305 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PFDN4Q9NQP4 134 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SIRT3Q9NTG7 399 aaPredicted RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.27□□□□□ -1.09
RIF1-208ENST00000457745 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SEMA5BQ9P283 1151 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 EPHA6Q9UF33 1036 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 CES1P1Q9UKY3 287 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 POMPQ9Y244 141 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 PCDHB14Q9Y5E9 798 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 A0A0A6YYC8 382 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 EME2A4GXA9 379 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 TLCD2A6NGC4 264 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 I3L1I5 382 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 PCDHGA12O60330 932 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 PRMT3O60678 531 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 GALR3O60755 368 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 RDH16O75452 317 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 CPSF4O95639 269 aaKnown RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 C8orf89P0DMQ9 161 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 NCK1P16333 377 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 TGM1P22735 817 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 SERPINB1P30740 379 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 KIR3DL1P43629 444 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 ALDH9A1P49189 494 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 CLNS1AP54105 237 aaKnown RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 HBA1P69905 142 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 PHEXP78562 749 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 SIM1P81133 766 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 LTB4RQ15722 352 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 TMEM35AQ53FP2 167 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 COQ5Q5HYK3 327 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 COX20Q5RI15 118 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 C10orf62Q5T681 223 aaPredicted RBP8.26□□□□□ -1.09
RIF1-208ENST00000457745 CYB5D1Q6P9G0 228 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 DBX2Q6ZNG2 339 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 DGAT2L6Q6ZPD8 337 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 OLIG3Q7RTU3 272 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 OR4N5Q8IXE1 308 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 CA13Q8N1Q1 262 aa8.26□□□□□ -1.09
RIF1-208ENST00000457745 FBXW8Q8N3Y1 598 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms