RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 SPATA19Q7Z5L4 167 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 GPR180Q86V85 440 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 PRSS58Q8IYP2 241 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 LIX1Q8N485 282 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 IL22RA1Q8N6P7 574 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 ADAMTS18Q8TE60 1221 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 OR52B2Q96RD2 323 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 EBF4Q9BQW3 602 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 CCDC28BQ9BUN5 200 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 WDR41Q9HAD4 459 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
LINC00887-204ENST00000456816 MS4A12Q9NXJ0 267 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 CTSFQ9UBX1 484 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 WASF3Q9UPY6 502 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 MRPS33Q9Y291 106 aaKnown RBP13.36□□□□□ -0.27
LINC00887-204ENST00000456816 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
LINC00887-204ENST00000456816 CACNA1AO00555 2505 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 UBDO15205 165 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 DNAJB6O75190 326 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 NR2F6P10588 404 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 BCKDHAP12694 445 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TCN2P20062 427 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 JAK1P23458 1154 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 ALDH9A1P49189 494 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TAS2R50P59544 299 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 STX1BP61266 288 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TRA2BP62995 288 aaKnown RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 RAE1P78406 368 aaKnown RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 SMU1Q2TAY7 513 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TBC1D25Q3MII6 688 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 MINDY4Q4G0A6 757 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 ZNF385CQ66K41 422 aaPredicted RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 LCN10Q6JVE6 187 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 GALNT18Q6P9A2 607 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 LARP4Q71RC2 724 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 PARP9Q8IXQ6 854 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TMEM132CQ8N3T6 1108 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 CLHC1Q8NHS4 586 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 C16orf78Q8WTQ4 265 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 KIAA1143Q96AT1 154 aaPredicted RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 MIEF2Q96C03 454 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
LINC00887-204ENST00000456816 MARK4Q96L34 752 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 C14orf105Q9NVL8 296 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 SIRT5Q9NXA8 310 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 DAPP1Q9UN19 280 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 TRIM33Q9UPN9 1127 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 PADI2Q9Y2J8 665 aa13.35□□□□□ -0.27
LINC00887-204ENST00000456816 AKAP10O43572 662 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 SHOX2O60902 331 aaPredicted RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 B4GALT2O60909 372 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 LRATO95237 230 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 FHP07954 510 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 IL3P08700 152 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 PRR35P0CG20 571 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 LIPCP11150 499 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 PRPS2P11908 318 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 SDC1P18827 310 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 NCF2P19878 526 aaPredicted RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 IL10P22301 178 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 STAT5AP42229 794 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 GSTM5P46439 218 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 ASMTP46597 345 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 PCBP4P57723 403 aaKnown RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 RPS15P62841 145 aaKnown RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 KIAA0040Q15053 153 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 NCF4Q15080 339 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 TMEM198Q66K66 360 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 FAM198BQ6UWH4 519 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 OVCH1Q7RTY7 1134 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 GFM2Q969S9 779 aaKnown RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 TBC1D20Q96BZ9 403 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 OR1F2PQ96R84 312 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 CSF3RQ99062 836 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 SPRY4Q9C004 299 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 AKIRIN1Q9H9L7 192 aaPredicted RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 MIEF1Q9NQG6 463 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 BAIAP2L1Q9UHR4 511 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 CROTQ9UKG9 612 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 NXT1Q9UKK6 140 aaKnown RBP13.34□□□□□ -0.27
LINC00887-204ENST00000456816 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
LINC00887-204ENST00000456816 KNTC1P50748 2209 aa13.33□□□□□ -0.27
LINC00887-204ENST00000456816 A0A1W2PR48 441 aa13.33□□□□□ -0.28
LINC00887-204ENST00000456816 GLOD5A6NK44 160 aa13.33□□□□□ -0.28
LINC00887-204ENST00000456816 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
LINC00887-204ENST00000456816 FAM227AF5H4B4 570 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms