RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 BRAT1Q6PJG6 821 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 Q6ZVU0 165 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 Q8N9G6 341 aaPredicted RBP16.92■□□□□ 0.3
PTPN6-204ENST00000456013 ST13P5Q8NFI4 369 aaPredicted RBP16.92■□□□□ 0.3
PTPN6-204ENST00000456013 C16orf78Q8WTQ4 265 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 WRAP53Q9BUR4 548 aaKnown RBP16.92■□□□□ 0.3
PTPN6-204ENST00000456013 RIOK2Q9BVS4 552 aaKnown RBP16.92■□□□□ 0.3
PTPN6-204ENST00000456013 TRIM39Q9HCM9 518 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 MYNNQ9NPC7 610 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 FZD3Q9NPG1 666 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 ERVK13-1Q9NX77 482 aa16.92■□□□□ 0.3
PTPN6-204ENST00000456013 DSPPQ9NZW4 1301 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 H3BQ06 376 aaPredicted RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SSX4O60224 188 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 ATG13O75143 517 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SLITRK5O94991 958 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 KRT75O95678 551 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 RECKO95980 971 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SCG5P05408 212 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 ETV3P41162 512 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 OR2B6P58173 313 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 LHX8Q68G74 356 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 FAM71E1Q6IPT2 247 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 MMAAQ8IVH4 418 aaKnown RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SLC30A8Q8IWU4 369 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 RASGEF1AQ8N9B8 481 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 OR5AK3PQ8NH89 298 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SETD6Q8TBK2 473 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 WDR34Q96EX3 536 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 FOPNLQ96NB1 174 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 ZSCAN5AQ9BUG6 496 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 TP63Q9H3D4 680 aaPredicted RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 SMURF1Q9HCE7 757 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 C14orf119Q9NWQ9 140 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 KCND3Q9UK17 655 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 RAB23Q9ULC3 237 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 TBC1D24Q9ULP9 559 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 WASH3PC4AMC7 463 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 IFNW1P05000 195 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 KRT8P05787 483 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 PRLHRP49683 370 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 COPZ1P61923 177 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF544Q6NX49 715 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 TMC5Q6UXY8 1006 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 KRT73Q86Y46 540 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 LAS2Q8IYD9 372 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 BTN2A2Q8WVV5 523 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 TMCO6Q96DC7 493 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 ASPNQ9BXN1 380 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 HHATLQ9HCP6 504 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 DMRT3Q9NQL9 472 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 DYRK4Q9NR20 520 aa16.91■□□□□ 0.3
PTPN6-204ENST00000456013 NFKBIL1Q9UBC1 381 aaPredicted RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 WBP11Q9Y2W2 641 aaKnown RBP16.91■□□□□ 0.3
PTPN6-204ENST00000456013 KLHL18O94889 574 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 HTR3AP46098 478 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 ASTLQ6HA08 431 aaPredicted RBP16.9■□□□□ 0.3
PTPN6-204ENST00000456013 GDPGP1Q6ZNW5 385 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 UBQLNLQ8IYU4 475 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 TAGAPQ8N103 731 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 WDR48Q8TAF3 677 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 MTERF3Q96E29 417 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 OR2A14Q96R47 310 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 TMEM121BQ9BXQ6 578 aaPredicted RBP16.9■□□□□ 0.3
PTPN6-204ENST00000456013 RHCGQ9UBD6 479 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 LSM2Q9Y333 95 aaKnown RBP16.9■□□□□ 0.3
PTPN6-204ENST00000456013 GRIP1Q9Y3R0 1128 aa16.9■□□□□ 0.3
PTPN6-204ENST00000456013 KIF26AQ9ULI4 1882 aaPredicted RBP16.9■□□□□ 0.3
PTPN6-204ENST00000456013 A0A1W2PRB8 838 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 URODP06132 367 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 ENDOUP21128 410 aaKnown RBP16.89■□□□□ 0.3
PTPN6-204ENST00000456013 TCEA1P23193 301 aaKnown RBP16.89■□□□□ 0.3
PTPN6-204ENST00000456013 CSTF2P33240 577 aaKnown RBP eCLIP16.89■□□□□ 0.3
PTPN6-204ENST00000456013 SNRPGP62308 76 aaKnown RBP16.89■□□□□ 0.3
PTPN6-204ENST00000456013 SLBPQ14493 270 aaKnown RBP eCLIP16.89■□□□□ 0.3
PTPN6-204ENST00000456013 PRSS53Q2L4Q9 553 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 BCL7AQ4VC05 210 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 UNC5DQ6UXZ4 953 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 GALNT6Q8NCL4 622 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 OR2A12Q8NGT7 310 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 OR6F1Q8NGZ6 308 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF480Q8WV37 535 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 EFCAB11Q9BUY7 163 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 CNPPD1Q9BV87 410 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 RACGAP1Q9H0H5 632 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF221Q9UK13 617 aa16.89■□□□□ 0.3
PTPN6-204ENST00000456013 LEFTY2O00292 366 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 CAPN5O15484 640 aaPredicted RBP16.89■□□□□ 0.29
PTPN6-204ENST00000456013 ENTPD6O75354 484 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 UGT2B17O75795 530 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 ADAP00813 363 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 TGFB1P01137 390 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 C1GALT1C1LP0DN25 315 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 NPPBP16860 134 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 POU1F1P28069 291 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 PDHA2P29803 388 aa16.89■□□□□ 0.29
PTPN6-204ENST00000456013 RPS19P39019 145 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms