RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 ABHD17AQ96GS6 310 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 SMIM10Q96HG1 83 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 SERPINI1Q99574 410 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 TBCDQ9BTW9 1192 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 NUDT9Q9BW91 350 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 SORBS1Q9BX66 1292 aaKnown RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 NPLQ9BXD5 320 aaPredicted RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 STMN4Q9H169 189 aaPredicted RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 CLK4Q9HAZ1 481 aaKnown RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 LYRM4Q9HD34 91 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 MID1IP1Q9NPA3 183 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 RRAGDQ9NQL2 400 aaPredicted RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 PRDM9Q9NQV7 894 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 SLC17A7Q9P2U7 560 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 PHF11Q9UIL8 331 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 PPT2Q9UMR5 302 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 DAPP1Q9UN19 280 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 SLC12A4Q9UP95 1085 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 PLLPQ9Y342 182 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 MMACHCQ9Y4U1 282 aa6.65□□□□□ -1.34
COMMD1-205ENST00000455659 HEMK1Q9Y5R4 338 aaPredicted RBP6.65□□□□□ -1.34
COMMD1-205ENST00000455659 LRRK2Q5S007 2527 aa6.65□□□□□ -1.35
COMMD1-205ENST00000455659 IGKV3D-11A0A0A0MRZ8 115 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 A0A0A6YYD5 115 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ARHGAP10A1A4S6 786 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 SAGE2PA6NJ88 616 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 FOXE1O00358 373 aaPredicted RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PPP6CO00743 305 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PRMT3O60678 531 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 DNAJB6O75190 326 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 EEDO75530 441 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ESRRBO95718 433 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PDGFAP04085 211 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 CELA2AP08217 269 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 NR2F6P10588 404 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 IMPDH1P20839 514 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ATP5A1P25705 553 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 BUD31P41223 144 aaPredicted RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 HTR6P50406 440 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 HNRNPFP52597 415 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 NAGLUP54802 743 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 DNAJB13P59910 316 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 NAA20P61599 178 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 AP2B1P63010 937 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ASPHQ12797 758 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 CUL3Q13618 768 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 RUNX2Q13950 521 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 NSDHLQ15738 373 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 BTBD16Q32M84 506 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 SFT2D3Q587I9 215 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 BEND6Q5SZJ8 279 aaPredicted RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 DEPDC1Q5TB30 811 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TCTN3Q6NUS6 607 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 CYP20A1Q6UW02 462 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TMEM205Q6UW68 189 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ASB18Q6ZVZ8 466 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 NDUFAF7Q7L592 441 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 CPEB2Q7Z5Q1 589 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 UBE3DQ7Z6J8 389 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ANKRD37Q7Z713 158 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 SCUBE1Q8IWY4 988 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PARP9Q8IXQ6 854 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 KBTBD2Q8IY47 623 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZCCHC7Q8N3Z6 543 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ACOT4Q8N9L9 421 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 BRIX1Q8TDN6 353 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TCP10LQ8TDR4 215 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 SREK1Q8WXA9 508 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TM9SF4Q92544 642 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 RGMAQ96B86 450 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 MTFMTQ96DP5 389 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 THOC3Q96J01 351 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PTCHD1Q96NR3 888 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 KCNA7Q96RP8 456 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 LPAR4Q99677 370 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 MAPKAP1Q9BPZ7 522 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TUBB6Q9BUF5 446 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 MECRQ9BV79 373 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF717Q9BY31 904 aaPredicted RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 MRPL1Q9BYD6 325 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 LHPPQ9H008 270 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF700Q9H0M5 742 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 BRF2Q9HAW0 419 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ATP13A2Q9NQ11 1180 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 PRTFDC1Q9NRG1 225 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 FARSBQ9NSD9 589 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 OXSMQ9NWU1 459 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 LYARQ9NX58 379 aaKnown RBP6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF225Q9UK10 706 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 FBXW2Q9UKT8 454 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF451Q9Y4E5 1061 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 TENM4Q6N022 2769 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 RELNP78509 3460 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 EXPH5Q8NEV8 1989 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms