RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 DMPKQ09013 629 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 SLAMF1Q13291 335 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 SLC9A5Q14940 896 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 USP30Q70CQ3 517 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 DGLUCYQ7Z3D6 616 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 OR52N2Q8NGI0 321 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 XAGE5Q8WWM1 108 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 COL26A1Q96A83 441 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 BARD1Q99728 777 aaKnown RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 SMIM31A0A1B0GVY4 71 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 C1orf226A1L170 272 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 BCHEP06276 602 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 DSTNP60981 165 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 SRP54P61011 504 aaKnown RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 E2F2Q14209 437 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 NDUFAF5Q5TEU4 345 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 FAIM2Q9BWQ8 316 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 RHBGQ9H310 441 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 IL1RAPQ9NPH3 570 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 SEMA3DO95025 777 aa13□□□□□ -0.33
CLK3-203ENST00000454830 HOXB9P17482 250 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 IKBIPQ70UQ0 350 aa13□□□□□ -0.33
CLK3-203ENST00000454830 CBLL1Q75N03 491 aa13□□□□□ -0.33
CLK3-203ENST00000454830 CEP68Q76N32 757 aa13□□□□□ -0.33
CLK3-203ENST00000454830 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SYNPOQ8N3V7 929 aa13□□□□□ -0.33
CLK3-203ENST00000454830 ZBED6CLQ96FA7 236 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 TOE1Q96GM8 510 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 MENTQ9BUN1 341 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SLC6A20Q9NP91 592 aa13□□□□□ -0.33
CLK3-203ENST00000454830 ANGPT4Q9Y264 503 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 IGKV1-8A0A0C4DH67 115 aa13□□□□□ -0.33
CLK3-203ENST00000454830 H3BSA7 217 aa13□□□□□ -0.33
CLK3-203ENST00000454830 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 DDX5P17844 614 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 MAGP20916 626 aa13□□□□□ -0.33
CLK3-203ENST00000454830 TEAD1P28347 426 aa13□□□□□ -0.33
CLK3-203ENST00000454830 RRM2P31350 389 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SHMT2P34897 504 aa13□□□□□ -0.33
CLK3-203ENST00000454830 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 NCBP2P52298 156 aaKnown RBP eCLIP13□□□□□ -0.339e-7■■■■□ 24.2
CLK3-203ENST00000454830 MAPK10P53779 464 aa13□□□□□ -0.33
CLK3-203ENST00000454830 KIAA1614Q5VZ46 1190 aa13□□□□□ -0.33
CLK3-203ENST00000454830 THAP5Q7Z6K1 395 aa13□□□□□ -0.33
CLK3-203ENST00000454830 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 OR13H1Q8NG92 308 aa13□□□□□ -0.33
CLK3-203ENST00000454830 MTERF3Q96E29 417 aa13□□□□□ -0.33
CLK3-203ENST00000454830 TEFMQ96QE5 360 aaKnown RBP13□□□□□ -0.33
CLK3-203ENST00000454830 HHIPQ96QV1 700 aa13□□□□□ -0.33
CLK3-203ENST00000454830 OSBPL10Q9BXB5 764 aa13□□□□□ -0.33
CLK3-203ENST00000454830 RAD21L1Q9H4I0 556 aa13□□□□□ -0.33
CLK3-203ENST00000454830 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 ERGP11308 486 aa13□□□□□ -0.33
CLK3-203ENST00000454830 CERS1P27544 350 aa13□□□□□ -0.33
CLK3-203ENST00000454830 NTSP30990 170 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SLC19A1P41440 591 aa13□□□□□ -0.33
CLK3-203ENST00000454830 BTN3A2P78410 334 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SPIBQ01892 262 aa13□□□□□ -0.33
CLK3-203ENST00000454830 VEZF1Q14119 521 aa13□□□□□ -0.33
CLK3-203ENST00000454830 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
CLK3-203ENST00000454830 MEP1AQ16819 746 aa13□□□□□ -0.33
CLK3-203ENST00000454830 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 CAMKMTQ7Z624 323 aa13□□□□□ -0.33
CLK3-203ENST00000454830 TTLQ8NG68 377 aa13□□□□□ -0.33
CLK3-203ENST00000454830 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
CLK3-203ENST00000454830 POLR1BQ9H9Y6 1135 aa13□□□□□ -0.33
CLK3-203ENST00000454830 EQTNQ9NQ60 294 aa13□□□□□ -0.33
CLK3-203ENST00000454830 FAM118AQ9NWS6 357 aa13□□□□□ -0.33
CLK3-203ENST00000454830 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
CLK3-203ENST00000454830 IFT80Q9P2H3 777 aaPredicted RBP13□□□□□ -0.33
CLK3-203ENST00000454830 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
CLK3-203ENST00000454830 SNRNP200O75643 2136 aaKnown RBP12.99□□□□□ -0.33
CLK3-203ENST00000454830 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 OR6C74A6NCV1 312 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
CLK3-203ENST00000454830 PIGAP37287 484 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 CDH12P55289 794 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 BPIFB6Q8NFQ5 453 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 TM9SF3Q9HD45 589 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 SLAMF7Q9NQ25 335 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 KRT84Q9NSB2 600 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 ZCCHC3Q9NUD5 404 aaKnown RBP12.99□□□□□ -0.33
CLK3-203ENST00000454830 TMEM184CQ9NVA4 438 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 THUMPD1Q9NXG2 353 aaKnown RBP12.99□□□□□ -0.33
CLK3-203ENST00000454830 ENTPD4Q9Y227 616 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 TRBC2A0A5B9 178 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 LRIT2A6NDA9 550 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 KCNJ13O60928 360 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 CLEC3AO75596 197 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 C7P10643 843 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 UQCRC2P22695 453 aa12.99□□□□□ -0.33
CLK3-203ENST00000454830 PCGF2P35227 344 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms