RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 C7orf34Q96L11 122 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 TSC22D3Q99576 134 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 BARD1Q99728 777 aaKnown RBP8.42□□□□□ -1.06
RPE-216ENST00000454822 C17orf62Q9BQA9 187 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 DOHHQ9BU89 302 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 NLNQ9BYT8 704 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 AMBRA1Q9C0C7 1298 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 RAD21L1Q9H4I0 556 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 TMEM38AQ9H6F2 299 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 TEX10Q9NXF1 929 aaPredicted RBP8.42□□□□□ -1.06
RPE-216ENST00000454822 OR6C2Q9NZP2 312 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 C5AR2Q9P296 337 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 IFT80Q9P2H3 777 aaPredicted RBP8.42□□□□□ -1.06
RPE-216ENST00000454822 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 SNX7Q9UNH6 387 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 SNX8Q9Y5X2 465 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 HS3ST3A1Q9Y663 406 aa8.42□□□□□ -1.06
RPE-216ENST00000454822 SNRNP200O75643 2136 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 A0A087WXM4 84 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 MYO1GB0I1T2 1018 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 M0QX08 132 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 PDPK1O15530 556 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SEMA4FO95754 770 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 DDX5P17844 614 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 DNAJA1P31689 397 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 SLC19A1P41440 591 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SSR2P43308 183 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ALDH3B2P48448 385 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 YPEL5P62699 121 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SELENOWP63302 87 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 CDK6Q00534 326 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 EPS8Q12929 822 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ALG11Q2TAA5 492 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZNF425Q6IV72 752 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZNF793Q6ZN11 406 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 RBM44Q6ZP01 1051 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 CCDC80Q76M96 950 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZC3H7AQ8IWR0 971 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 ZNF555Q8NEP9 628 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZFP28Q8NHY6 868 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 EXOSC8Q96B26 276 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 MS4A6EQ96DS6 147 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SARGQ9BW04 601 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 YTHDF1Q9BYJ9 559 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 LTB4R2Q9NPC1 389 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 PRDM7Q9NQW5 492 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 USP36Q9P275 1121 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 NDRG2Q9UN36 371 aaKnown RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 DGKBQ9Y6T7 804 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 A6NCN8 305 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 TRIM64CA6NLI5 447 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 WASHC1A8K0Z3 465 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 C10orf142B7Z368 130 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 C4orf51C9J302 202 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 BTN3A3O00478 584 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 VILLO15195 856 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 MBTPS2O43462 519 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 BMP10O95393 424 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 DRD2P14416 443 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 FPR1P21462 350 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 GSTM2P28161 218 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 FRKP42685 505 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 ARHGDIAP52565 204 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SLAMF1Q13291 335 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 KCNAB2Q13303 367 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZNF630Q2M218 657 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 TOR1AIP1Q5JTV8 583 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ABHD17CQ6PCB6 329 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 CYP4Z1Q86W10 505 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 NRROSQ86YC3 692 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 TBC1D19Q8N5T2 526 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 MFSD9Q8NBP5 474 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 TAMM41Q96BW9 452 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 NEURL3Q96EH8 262 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ZNF764Q96H86 408 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 GABARAPL1Q9H0R8 117 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SRMSQ9H3Y6 488 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 C6orf106Q9H6K1 298 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 SYNPO2LQ9H987 977 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 TUBA8Q9NY65 449 aaPredicted RBP8.41□□□□□ -1.06
RPE-216ENST00000454822 TAS2R7Q9NYW3 318 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 KLF15Q9UIH9 416 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 C3orf18Q9UK00 162 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 SNX11Q9Y5W9 270 aa8.41□□□□□ -1.06
RPE-216ENST00000454822 ERI3O43414 337 aaKnown RBP8.4□□□□□ -1.06
RPE-216ENST00000454822 DPM1O60762 260 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 OPN1SWP03999 348 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 IGHV4-34P06331 123 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 ARAFP10398 606 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 F3P13726 295 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 HIST1H1TP22492 207 aaPredicted RBP8.4□□□□□ -1.06
RPE-216ENST00000454822 GSTT1P30711 240 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 POLR2IP36954 125 aaKnown RBP8.4□□□□□ -1.06
RPE-216ENST00000454822 PIGAP37287 484 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 RAD23AP54725 363 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 ITGA1P56199 1179 aa8.4□□□□□ -1.06
RPE-216ENST00000454822 DSTNP60981 165 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms