RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FBXW8Q8N3Y1 598 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 TMEM251Q8N6I4 163 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ANKRD53Q8N9V6 530 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 OR5L2Q8NGL0 311 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ANKRD7Q92527 254 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PYCR2Q96C36 320 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PDLIM5Q96HC4 596 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 NAT9Q9BTE0 207 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PRTFDC1Q9NRG1 225 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PNO1Q9NRX1 252 aaKnown RBP13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ACAD8Q9UKU7 415 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ACANP16112 2415 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF469Q96JG9 3925 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 A6NNC1 897 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 HAX1O00165 279 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 B3GALT2O43825 422 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 OR6B1O95007 311 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 B3GALT4O96024 378 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 PGAM1P18669 254 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 SOX3P41225 446 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 MAGEA5P43359 124 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 HNMTP50135 292 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 DGKQP52824 942 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 SLC10A1Q14973 349 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 DAZAP2Q15038 168 aaPredicted RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 ANKRD22Q5VYY1 191 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 NXPE4Q6UWF7 544 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 PAMR1Q6UXH9 720 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 IL20RBQ6UXL0 311 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 DND1Q8IYX4 353 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 OR5M9Q8NGP3 310 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 NDNQ99608 321 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 GPATCH1Q9BRR8 931 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 RHBGQ9H310 441 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 QPCTLQ9NXS2 382 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 FLNAP21333 2647 aaKnown RBP13.24□□□□□ -0.29
LYSMD3-202ENST00000453259 PINLYPA6NC86 204 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 FAM171A2A8MVW0 826 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 DVL2O14641 736 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 KRT14P02533 472 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 RAF1P04049 648 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 P04436 131 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 CCDC175P0C221 793 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 GNAZP19086 355 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 HNF4AP41235 474 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 ASCL1P50553 236 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 HK2P52789 917 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 ADAM8P78325 824 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 BTN3A2P78410 334 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 CDKL1Q00532 357 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 FOXO1Q12778 655 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 SERTAD2Q14140 314 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 SF3B4Q15427 424 aaKnown RBP eCLIP13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 XKR6Q5GH73 641 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 FAM47EQ6ZV65 393 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 WDR53Q7Z5U6 358 aaPredicted RBP13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 TMPRSS11BQ86T26 416 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 THOC6Q86W42 341 aaKnown RBP13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 CDC20BQ86Y33 519 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 LDAHQ9H6V9 325 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 IARS2Q9NSE4 1012 aaKnown RBP13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 VTI1BQ9UEU0 232 aa13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 MTRF1LQ9UGC7 380 aaKnown RBP13.23□□□□□ -0.29
LYSMD3-202ENST00000453259 TRGV5A0A0B4J1U4 118 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 LRIT2A6NDA9 550 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CTNSO60931 367 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CLEC3AO75596 197 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 ADH7P40394 386 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 VPS41P49754 854 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CDKN2DP55273 166 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CCZ1BP86790 482 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 TGM3Q08188 693 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 CRYMQ14894 314 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 TRIP13Q15645 432 aaPredicted RBP13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 MPEG1Q2M385 716 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 ADPRMQ3LIE5 342 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 SBSNQ6UWP8 590 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 TMIGD1Q6UXZ0 262 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF662Q6ZS27 426 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 LIX1LQ8IVB5 337 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 TRIM58Q8NG06 486 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 OR2L5Q8NG80 312 aa13.22□□□□□ -0.29
LYSMD3-202ENST00000453259 RNASE6Q93091 150 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms