RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ZNF133P52736 654 aaPredicted RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 CLDN17P56750 224 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 KIAA0040Q15053 153 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 PCK2Q16822 640 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 LIPJQ5W064 366 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 OR4C11Q6IEV9 310 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 ARMCX5Q6P1M9 558 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 DET1Q7L5Y6 550 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 UBQLNLQ8IYU4 475 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 BANPQ8N9N5 519 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 NXNL1Q96CM4 212 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 TMCO6Q96DC7 493 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 MUS81Q96NY9 551 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 ALKBH3Q96Q83 286 aaPredicted RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 CPNE1Q99829 537 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 SCRT1Q9BWW7 348 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 PINK1Q9BXM7 581 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 WDR41Q9HAD4 459 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 CNTNAP1P78357 1384 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 PXDNQ92626 1479 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 TNRC6CQ9HCJ0 1690 aaKnown RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 RGPD3A6NKT7 1758 aaPredicted RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 RGPD4Q7Z3J3 1758 aa1.41□□□□□ -2.18
LRCH3-209ENST00000452660 N4BP2Q86UW6 1770 aaPredicted RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 LAMA2P24043 3122 aaKnown RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 RANBP2P49792 3224 aaKnown RBP1.41□□□□□ -2.18
LRCH3-209ENST00000452660 SALL1Q9NSC2 1324 aa1.4□□□□□ -2.18
LRCH3-209ENST00000452660 PAPPAQ13219 1627 aa1.4□□□□□ -2.18
LRCH3-209ENST00000452660 NRXN3Q9Y4C0 1643 aa1.4□□□□□ -2.18
LRCH3-209ENST00000452660 ITSN1Q15811 1721 aa1.4□□□□□ -2.18
LRCH3-209ENST00000452660 CENPFP49454 3210 aa1.4□□□□□ -2.18
LRCH3-209ENST00000452660 TRBV5-4A0A0C4DH59 114 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 A0A1W2PPM1 405 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 PINLYPA6NC86 204 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ZSCAN5CA6NGD5 496 aaPredicted RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 TRIM77I1YAP6 450 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 AP3D1O14617 1153 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 NPHP1O15259 732 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 LATO43561 262 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 FRAT2O75474 233 aaPredicted RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 P0C879 139 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 F3P13726 295 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 MYL6BP14649 208 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 DNASE1P24855 282 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 HSD17B3P37058 310 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 FEN1P39748 380 aaKnown RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 BRCC3P46736 316 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 POLR2LP62875 67 aaKnown RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 MC1RQ01726 317 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 CREB5Q02930 508 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 KCTD2Q14681 263 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 RBBP7Q16576 425 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 C9orf129Q5T035 196 aaKnown RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 REP15Q6BDI9 236 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 NAA16Q6N069 864 aaPredicted RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 Q7L0L9 218 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 MCM10Q7L590 875 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 SZRD1Q7Z422 152 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 C5orf24Q7Z6I8 188 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 SMC5Q8IY18 1101 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 TEX26Q8N6G2 289 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 Q8N9L7 120 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 OR6T1Q8NGN1 323 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ROBO4Q8WZ75 1007 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 FRAT1Q92837 279 aaPredicted RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 TIGD1Q96MW7 591 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF830Q96NB3 372 aaPredicted RBP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 RANBP9Q96S59 729 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 SLC2A11Q9BYW1 496 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 RNF121Q9H920 327 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.4□□□□□ -2.19
LRCH3-209ENST00000452660 TBC1D22BQ9NU19 505 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 OLAHQ9NV23 265 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 SLC12A6Q9UHW9 1150 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ITGA11Q9UKX5 1188 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 CPQQ9Y646 472 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 PEAK1Q9H792 1746 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 NEXMIFQ5QGS0 1516 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 DUOX2Q9NRD8 1548 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 CEP290O15078 2479 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ADAMTS13Q76LX8 1427 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 ITIH6Q6UXX5 1313 aa1.4□□□□□ -2.19
LRCH3-209ENST00000452660 KAT6BQ8WYB5 2073 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 PRUNE2Q8WUY3 3088 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 PXDNLA1KZ92 1463 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 ADGRL2O95490 1459 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 ZNFX1Q9P2E3 1918 aaKnown RBP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 EPOPA6NHQ4 379 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 C17orf105B2RV13 164 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 ODC1P11926 461 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 KRT3P12035 628 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 SKILP12757 684 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 CD1DP15813 335 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 PCGF2P35227 344 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 SLC1A6P48664 564 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 RALGDSQ12967 914 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 IDI1Q13907 227 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 NONOQ15233 471 aaKnown RBP eCLIP1.39□□□□□ -2.19
LRCH3-209ENST00000452660 RASA2Q15283 850 aa1.39□□□□□ -2.19
LRCH3-209ENST00000452660 Q6ZVQ6 151 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms