RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 POLEQ07864 2286 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 USP9XQ93008 2570 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 G3V2L1 256 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 MAN1A2O60476 641 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 CTNSO60931 367 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 SLU7O95391 586 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 NUDT17P0C025 328 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 PCNAP12004 261 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 IMPDH1P20839 514 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 PTX3P26022 381 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 TSFMP43897 325 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 CDH13P55290 713 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 HERVK_113P63132 956 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 SLC18A2Q05940 514 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ZNF678Q5SXM1 525 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 MFSD4BQ5TF39 518 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 FAM219BQ5XKK7 198 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 OR4C11Q6IEV9 310 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 LETMD1Q6P1Q0 360 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 LINC00696Q6ZRV3 163 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ZNF595Q8IYB9 648 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ZCCHC7Q8N3Z6 543 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 SIRT6Q8N6T7 355 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 TM9SF4Q92544 642 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ANKRD9Q96BM1 317 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 SNRNP40Q96DI7 357 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 C19orf60Q96EN9 201 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 LPAR4Q99677 370 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ERVK-6Q9BXR3 956 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 ROGDIQ9GZN7 287 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 DDX31Q9H8H2 851 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 LUZP4Q9P127 313 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 DCDC2Q9UHG0 476 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 NTNG1Q9Y2I2 539 aa15.09■□□□□ 0.01
SCAMP4-205ENST00000452128 A0A088AWK7 358 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 TTLL8A6PVC2 850 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 SAP18O00422 153 aaKnown RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 SH3BGRLO75368 114 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 WDPCPO95876 746 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 PROCP04070 461 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 ZNF10P21506 573 aaPredicted RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 ATP5F1P24539 256 aaPredicted RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 PPP2R1BP30154 601 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 TNFSF10P50591 281 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 AP2B1P63010 937 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 IGLV3-21P80748 117 aaPredicted RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 SRSF1Q07955 248 aaKnown RBP eCLIP15.08■□□□□ 0
SCAMP4-205ENST00000452128 TGM3Q08188 693 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 BTBD16Q32M84 506 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 FRG2Q64ET8 278 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 APCDD1LQ8NCL9 501 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 MYRIPQ8NFW9 859 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 OR4F6Q8NGB9 312 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 DNAJB14Q8TBM8 379 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 CPT1CQ8TCG5 803 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 ADAMTS18Q8TE60 1221 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 EPS8L3Q8TE67 593 aaKnown RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 UBLCP1Q8WVY7 318 aaPredicted RBP15.08■□□□□ 0
SCAMP4-205ENST00000452128 CAVIN3Q969G5 261 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 RGMAQ96B86 450 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 L3HYPDHQ96EM0 354 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 TMEM237Q96Q45 408 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 FRG2BQ96QU4 278 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 PLA2G3Q9NZ20 509 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 ASB4Q9Y574 426 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 LRRK2Q5S007 2527 aa15.08■□□□□ 0
SCAMP4-205ENST00000452128 COL12A1Q99715 3063 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 A0A0A6YYD5 115 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 SAGE2PA6NJ88 616 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 PSMD12O00232 456 aaPredicted RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 TMPRSS11DO60235 418 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 EEDO75530 441 aaKnown RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 CRHR1P34998 444 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 SLCO1A2P46721 670 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 CCNG1P51959 295 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 KCNC4Q03721 635 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 CLCQ05315 142 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 ACTN3Q08043 901 aaPredicted RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 TERF2Q15554 542 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 AP5B1Q2VPB7 878 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 ACER2Q5QJU3 275 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 C10orf62Q5T681 223 aaPredicted RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 IRAK1BP1Q5VVH5 260 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 RPUSD3Q6P087 351 aaKnown RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 MILR1Q7Z6M3 343 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 KIF2BQ8N4N8 673 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 FAM47BQ8NA70 645 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 OR2W6PQ8NHA6 318 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 REPS1Q96D71 796 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 SEMA4BQ9NPR2 832 aaPredicted RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 PRTFDC1Q9NRG1 225 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 STMN3Q9NZ72 180 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 VTI1BQ9UEU0 232 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 ZNF223Q9UK11 482 aaPredicted RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 RAB21Q9UL25 225 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 ATG4BQ9Y4P1 393 aa15.07■□□□□ 0
SCAMP4-205ENST00000452128 ASH1LQ9NR48 2969 aaKnown RBP15.07■□□□□ 0
SCAMP4-205ENST00000452128 CLDN4O14493 209 aa15.06■□□□□ 0
SCAMP4-205ENST00000452128 PROM1O43490 865 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms