RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SPINK14Q6IE38 97 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 H3F3CQ6NXT2 135 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TRIM40Q6P9F5 258 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 QSOX2Q6ZRP7 698 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 MAMDC2Q7Z304 686 aaPredicted RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 RPS19BP1Q86WX3 136 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 MYLK4Q86YV6 388 aaPredicted RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 KLHDC8AQ8IYD2 350 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 PDPRQ8NCN5 879 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TMEM52Q8NDY8 209 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 ARMC2Q8NEN0 867 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TTLQ8NG68 377 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 KCTD4Q8WVF5 259 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 KIAA1191Q96A73 305 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 NXNL1Q96CM4 212 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 PTCD3Q96EY7 689 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 SMIM10Q96HG1 83 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 UBXN10Q96LJ8 280 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 F2RL3Q96RI0 385 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 CAPS2Q9BXY5 557 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 REXO4Q9GZR2 422 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 PRTFDC1Q9NRG1 225 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 GPRC5BQ9NZH0 403 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 NUDT4Q9NZJ9 180 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 LRFN1Q9P244 771 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 SEC14L3Q9UDX4 400 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 UNC79Q9P2D8 2635 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 A0A088AWK7 358 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 IGKV3D-11A0A0A0MRZ8 115 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 TCRBV16S1A1N1A0A5B0 115 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 TGFBR3LH3BV60 316 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 SAP18O00422 153 aaKnown RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 ZNHIT1O43257 154 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 KERAO60938 352 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 CLEC3AO75596 197 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 WISP2O76076 250 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ACSL3O95573 720 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 TBX6O95947 436 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 LTA4HP09960 611 aaKnown RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 GFAPP14136 432 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 EPORP19235 508 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ZNF10P21506 573 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 CRABP2P29373 138 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 GGT5P36269 586 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 PER3P56645 1201 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 RAB38P57729 211 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ID2Q02363 134 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 TGM3Q08188 693 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 MAPKAPK3Q16644 382 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 HIST2H2ACQ16777 129 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 PAGE2BQ5JRK9 111 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ZNF324BQ6AW86 544 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 HIST2H2AA3Q6FI13 130 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 LRRC70Q7Z2Q7 622 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ZNF572Q7Z3I7 529 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 GALNTL5Q7Z4T8 443 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ISCA2Q86U28 154 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 RNF175Q8N4F7 328 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 MDS2Q8NDY4 140 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 OR2L5Q8NG80 312 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 STAG3L4Q8TBR4 150 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ATOH8Q96SQ7 321 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 EFCAB11Q9BUY7 163 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 SORBS1Q9BX66 1292 aaKnown RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 DEFB126Q9BYW3 111 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 CD244Q9BZW8 370 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 PHACTR1Q9C0D0 580 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 NT5DC2Q9H857 520 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 NMRAL1Q9HBL8 299 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 SNX15Q9NRS6 342 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 NINJ2Q9NZG7 142 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 CPSF2Q9P2I0 782 aaKnown RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 OPTCQ9UBM4 332 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 PTBP2Q9UKA9 531 aaKnown RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 FBXW2Q9UKT8 454 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ZNF490Q9ULM2 529 aaPredicted RBP8.11□□□□□ -1.11
RFX3-209ENST00000451859 ACOT9Q9Y305 439 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 MMACHCQ9Y4U1 282 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 ANGPTL3Q9Y5C1 460 aa8.11□□□□□ -1.11
RFX3-209ENST00000451859 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 PHF3Q92576 2039 aaKnown RBP8.1□□□□□ -1.11
RFX3-209ENST00000451859 A0A096LPK6 155 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 LRRC14BA6NHZ5 514 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 NPIPA5E9PKD4 350 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 CLDN4O14493 209 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 FCHO1O14526 889 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 TGFB1P01137 390 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 IFNA16P05015 189 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 C2P06681 752 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 GSTM2P28161 218 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 PHBP35232 272 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 DCTP40126 519 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 ARL1P40616 181 aaPredicted RBP8.1□□□□□ -1.11
RFX3-209ENST00000451859 RFC3P40938 356 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 MTTPP55157 894 aa8.1□□□□□ -1.11
RFX3-209ENST00000451859 LIM2P55344 173 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms