RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 TMCO6Q96DC7 493 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 RNF31Q96EP0 1072 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CDCA5Q96FF9 252 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 SLC39A13Q96H72 371 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 PYURFQ96I23 114 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 NEDD4LQ96PU5 975 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 MCCC1Q96RQ3 725 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CAMKK2Q96RR4 588 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZNF382Q96SR6 550 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 ACOX2Q99424 681 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 BARD1Q99728 777 aaKnown RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 COLEC11Q9BWP8 271 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 TAPBPLQ9BX59 468 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 TEX13BQ9BXU2 312 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 ROGDIQ9GZN7 287 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 DERL2Q9GZP9 239 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 SRRQ9GZT4 340 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 NUAK2Q9H093 628 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CXCL16Q9H2A7 254 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 MTG2Q9H4K7 406 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 IKZF5Q9H5V7 419 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZBTB20Q9HC78 741 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 B3GNT2Q9NY97 397 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 TAS2R9Q9NYW1 312 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 SLC25A37Q9NYZ2 338 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 STMN3Q9NZ72 180 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 VAPAQ9P0L0 249 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 FNIP2Q9P278 1114 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 MARCH4Q9P2E8 410 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 B4GALT6Q9UBX8 382 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 EVLQ9UI08 416 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 EIF2B4Q9UI10 523 aaKnown RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 PSORS1C1Q9UIG5 152 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 KLHL21Q9UJP4 597 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 PCTPQ9UKL6 214 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CDH9Q9ULB4 789 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 SNX6Q9UNH7 406 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 PRELID1Q9Y255 219 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 MAN2B2Q9Y2E5 1009 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 CAB39Q9Y376 341 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 HS3ST4Q9Y661 456 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 V9GYH0 126 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 PCSK5Q92824 1860 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 NYNRINQ9P2P1 1898 aaKnown RBP3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 SHROOM3Q8TF72 1996 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 WDR90Q96KV7 1748 aa3.98□□□□□ -1.77
HMGB3P22-202ENST00000451823 LOC285095A0A1B0GVY8 99 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ELOVL7A1L3X0 281 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MEIOCA2RUB1 952 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 LCHNA4D1U4 455 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZSCAN5BA6NJL1 495 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZAR1LA6NP61 321 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 LEUTXA8MZ59 168 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 AHRRA9YTQ3 701 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MASP2O00187 686 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 E2F3O00716 465 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 KIAA0355O15063 1070 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CD3EAPO15446 510 aaKnown RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TEX28O15482 410 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 LDB2O43679 373 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 SNX2O60749 519 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ECI2O75521 394 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 BEST1O76090 585 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 RECQL5O94762 991 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ARIH2O95376 493 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MLYCDO95822 493 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TSPAN12O95859 305 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 HLA-DQB1P01920 261 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MMP2P08253 660 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ATXN1LP0C7T5 689 aaKnown RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 GAAP10253 952 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ALOX12P18054 663 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CD53P19397 219 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CD72P21854 359 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZFP36P26651 326 aaKnown RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CHRNA5P30532 468 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TNFSF8P32971 234 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CSTF2P33240 577 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 S100A5P33763 92 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 HNF4AP41235 474 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 NDUFV1P49821 464 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 SERPINH1P50454 418 aaKnown RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CLCN3P51790 818 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TPD52P55327 224 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 WNT3AP56704 352 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MTPNP58546 118 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 FAM189BP81408 668 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 MRPS21P82921 87 aaKnown RBP3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 CREMQ03060 361 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ELP6Q0PNE2 266 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 FAPQ12884 760 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 SLAMF1Q13291 335 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 SEMA3AQ14563 771 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 ZNF79Q15937 498 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 PFKFB4Q16877 469 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TIGD6Q17RP2 521 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 DCAF4L1Q3SXM0 396 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 TBRG1Q3YBR2 411 aa3.97□□□□□ -1.77
HMGB3P22-202ENST00000451823 GLYR1Q49A26 553 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms