RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 PCYOX1Q9UHG3 505 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 EIF3LQ9Y262 564 aaKnown RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 NPFFR2Q9Y5X5 522 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 LIPGQ9Y5X9 500 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 NFS1Q9Y697 457 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 KIAA1549Q9HCM3 1950 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 IGKV3D-11A0A0A0MRZ8 115 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 TRGV5A0A0B4J1U4 118 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CCDC162PA2VCL2 907 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 SH3D21A4FU49 640 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 A8MVJ9 347 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 APOC4-APOC2K7ER74 178 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 SGK494L7N484 410 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 PRMT5O14744 637 aaPredicted RBP6.75□□□□□ -1.33
RBM39-218ENST00000449489 HAT1O14929 419 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CASKO14936 926 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 DNAJA2O60884 412 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 APOC2P02655 101 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 TPH1P17752 444 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 IL1RNP18510 177 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ENDOUP21128 410 aaKnown RBP6.75□□□□□ -1.33
RBM39-218ENST00000449489 PSMB4P28070 264 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 RBL1P28749 1068 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ATP5DP30049 168 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 OPRM1P35372 400 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 MAGEA5P43359 124 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 GATA4P43694 442 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 GPR143P51810 404 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ZNF136P52737 540 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 SKP1P63208 163 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 SLC7A5Q01650 507 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ACVR1Q04771 509 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CAPRIN1Q14444 709 aaKnown RBP6.75□□□□□ -1.33
RBM39-218ENST00000449489 HERC3Q15034 1050 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 PDSS2Q86YH6 399 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 PPHLN1Q8NEY8 458 aaKnown RBP6.75□□□□□ -1.33
RBM39-218ENST00000449489 B3GNT7Q8NFL0 401 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 LKAAEAR1Q8TD35 194 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 IGFBPL1Q8WX77 278 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 MEGF10Q96KG7 1140 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CCL19Q99731 98 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CNPPD1Q9BV87 410 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 LDAHQ9H6V9 325 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ACKR4Q9NPB9 350 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 SPTLC3Q9NUV7 552 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 TMEM184CQ9NVA4 438 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 HPF1Q9NWY4 346 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 QPCTLQ9NXS2 382 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 ERVK-11Q9UQG0 969 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 CR1P17927 2039 aa6.75□□□□□ -1.33
RBM39-218ENST00000449489 MED12LQ86YW9 2145 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 CMYA5Q8N3K9 4069 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 SYNDIG1LA6NDD5 238 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 IQCF5A8MTL0 148 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 E7ENX8 843 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PDPK1O15530 556 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 RDH16O75452 317 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 CDC123O75794 336 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 ZFAND5O76080 213 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 SIX3O95343 332 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 STATHP02808 62 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 TMEM253P0C7T8 217 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 FAM157CP0CG43 387 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 CTSSP25774 331 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 BDKRB1P46663 353 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PTH2RP49190 550 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PNLIPRP1P54315 467 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 TAP2Q03519 686 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 RUNX1T1Q06455 604 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 TBL3Q12788 808 aaKnown RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 GBX1Q14549 363 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 POU6F1Q14863 301 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 SIX1Q15475 284 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 NFKBIBQ15653 356 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 TYSND1Q2T9J0 566 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 CHRFAM7AQ494W8 412 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 AARS2Q5JTZ9 985 aaKnown RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 NSUN5P2Q63ZY6 315 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 AFTPHQ6ULP2 937 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 RBM43Q6ZSC3 357 aaKnown RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 MICALCLQ6ZW33 695 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 BBS12Q6ZW61 710 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 OTOAQ7RTW8 1153 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 LRRC6Q86X45 466 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 FBXO15Q8NCQ5 510 aaPredicted RBP6.74□□□□□ -1.33
RBM39-218ENST00000449489 TNIP2Q8NFZ5 429 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 OR13J1Q8NGT2 312 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 OR4L1Q8NH43 312 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PEX13Q92968 403 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 HSPBAP1Q96EW2 488 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PERPQ96FX8 193 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 VMP1Q96GC9 406 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
RBM39-218ENST00000449489 SCYL1Q96KG9 808 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms