RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 C9JVG2 144 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 LRATO95237 230 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 PIM1P11309 404 aaPredicted RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 FGF5P12034 268 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 KIR3DL1P43629 444 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 RASSF2P50749 326 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 LIM2P55344 173 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 C2orf80Q0P641 193 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 TIGD2Q4W5G0 525 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 NDUFAF5Q5TEU4 345 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 RIPOR1Q6ZS17 1223 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 DPP10Q8N608 796 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 SLC7A6OSQ96CW6 309 aaPredicted RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 OR6C1Q96RD1 312 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 BHLHE41Q9C0J9 482 aaPredicted RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 EFCAB1Q9HAE3 211 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 CUTCQ9NTM9 273 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 ATAD3AQ9NVI7 634 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 ATG4BQ9Y4P1 393 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 A0A1W2PR48 441 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 C1orf226A1L170 272 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 ERICH4A6NGS2 130 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 ANGPT2O15123 496 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 SCN2BO60939 215 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 COX7A2P14406 83 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 DDX5P17844 614 aaKnown RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 HNRNPFP52597 415 aaKnown RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 PHC1P78364 1004 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 MC1RQ01726 317 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 RUNX2Q13950 521 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 HACD2Q6Y1H2 254 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 MED25Q71SY5 747 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 RETREG3Q86VR2 466 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 NATD1Q8N6N6 113 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 OR7A2PQ8NGA2 310 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 NUDT8Q8WV74 236 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 GFM2Q969S9 779 aaKnown RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 VPS33AQ96AX1 596 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 LIN37Q96GY3 246 aaPredicted RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 MAPKAP1Q9BPZ7 522 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 FBXO8Q9NRD0 319 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 IRAK4Q9NWZ3 460 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 FAM120CQ9NX05 1096 aaKnown RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 LEF1Q9UJU2 399 aaPredicted RBP18.23■□□□□ 0.51
RPS28-202ENST00000449223 RARRES3Q9UL19 164 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 PCDHB3Q9Y5E6 796 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 PCDHA9Q9Y5H5 950 aa18.23■□□□□ 0.51
RPS28-202ENST00000449223 DMXL1Q9Y485 3027 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 B4E171 279 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 ZNF749O43361 778 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 AKAP10O43572 662 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 AIFM1O95831 613 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 NPPAP01160 153 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 S100A3P33764 101 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CPOXP36551 454 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 BUD31P41223 144 aaPredicted RBP18.22■□□□□ 0.51
RPS28-202ENST00000449223 TSPAN7P41732 249 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 WNT3P56703 355 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 NCALDP61601 193 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 MC2RQ01718 297 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 TNFRSF17Q02223 184 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 LRRC74AQ0VAA2 488 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 ISXQ2M1V0 245 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CPTPQ5TA50 214 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 REP15Q6BDI9 236 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 RHBDD2Q6NTF9 364 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 PRMT9Q6P2P2 845 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CACTIN-AS1Q8N1I8 211 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 PCYOX1LQ8NBM8 494 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 DEFB124Q8NES8 71 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 OR9A4Q8NGU2 314 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CDC26Q8NHZ8 85 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 ADAMTS18Q8TE60 1221 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 ROPN1LQ96C74 230 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 RCN3Q96D15 328 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CMKLR1Q99788 373 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 NDC1Q9BTX1 674 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 MIEF1Q9NQG6 463 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 OCIAD1Q9NX40 245 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CES1P1Q9UKY3 287 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 MAN2B2Q9Y2E5 1009 aa18.22■□□□□ 0.51
RPS28-202ENST00000449223 CROCCQ5TZA2 2017 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 A0A0A6YYC8 382 aaPredicted RBP18.21■□□□□ 0.51
RPS28-202ENST00000449223 I3L1I5 382 aaPredicted RBP18.21■□□□□ 0.51
RPS28-202ENST00000449223 DSCR3O14972 297 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 LAMP1P11279 417 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 PTPN4P29074 926 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 FRKP42685 505 aaPredicted RBP18.21■□□□□ 0.51
RPS28-202ENST00000449223 AVPR1BP47901 424 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 DGKQP52824 942 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.21■□□□□ 0.51
RPS28-202ENST00000449223 ASRGL1Q7L266 308 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 ZNF771Q7L3S4 317 aaPredicted RBP18.21■□□□□ 0.51
RPS28-202ENST00000449223 PPP1R3BQ86XI6 285 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 TICAM1Q8IUC6 712 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 CA13Q8N1Q1 262 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 RBM15BQ8NDT2 890 aaKnown RBP18.21■□□□□ 0.51
RPS28-202ENST00000449223 DNAJB8Q8NHS0 232 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 PPCDCQ96CD2 204 aa18.21■□□□□ 0.51
RPS28-202ENST00000449223 DUSP26Q9BV47 211 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms