RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ITGAXP20702 1163 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 OLR1P78380 273 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 TRPM8Q7Z2W7 1104 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 GALNT15Q8N3T1 639 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 SLC38A9Q8NBW4 561 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 OR9I1Q8NGQ6 314 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 MMABQ96EY8 250 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-203ENST00000449049 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 TAAR9Q96RI9 348 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 TEX10Q9NXF1 929 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-203ENST00000449049 PISDQ9UG56 409 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 ATG4BQ9Y4P1 393 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 TMEM184BQ9Y519 407 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-203ENST00000449049 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
SHMT2-203ENST00000449049 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-203ENST00000449049 A0A1W2PR48 441 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 PROM1O43490 865 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 ALAS2P22557 587 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 PIK3R1P27986 724 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 IL12AP29459 219 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 CLNS1AP54105 237 aaKnown RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 TNFRSF17Q02223 184 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 FUNDC1Q8IVP5 155 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 KRTCAP2Q8N6L1 136 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 GLB1L3Q8NCI6 653 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 CDC26Q8NHZ8 85 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 TESCQ96BS2 214 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 GBP5Q96PP8 586 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 ZPBPQ9BS86 351 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 CLMPQ9H6B4 373 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 MS4A12Q9NXJ0 267 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 FBXW2Q9UKT8 454 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 SATB2Q9UPW6 733 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 SCAMP2O15127 329 aaKnown RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 LRATO95237 230 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 RORAP35398 523 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 MAPK10P53779 464 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 RAB38P57729 211 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 C2orf80Q0P641 193 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 PDE7AQ13946 482 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 DSG2Q14126 1118 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 HEPACAMQ14CZ8 416 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 NDUFAF5Q5TEU4 345 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF385CQ66K41 422 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 C6orf89Q6UWU4 347 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 TREML1Q86YW5 311 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 STARD8Q92502 1023 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 MTERF3Q96E29 417 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF764Q96H86 408 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-203ENST00000449049 LRFN5Q96NI6 719 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 REEP4Q9H6H4 257 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 ATP6V1HQ9UI12 483 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
SHMT2-203ENST00000449049 PTPRBP23467 1997 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 WDR87Q6ZQQ6 2873 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 FAM234BA2RU67 622 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 CHST10O43529 356 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 AKAP10O43572 662 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 TBX19O60806 448 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 AIFM1O95831 613 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ONECUT2O95948 504 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 FURINP09958 794 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 DRD2P14416 443 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 CD1EP15812 388 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF28P17035 718 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 DDCP20711 480 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 HPCAL1P37235 193 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 RPL3P39023 403 aaKnown RBP13.27□□□□□ -0.28
SHMT2-203ENST00000449049 BUD31P41223 144 aaPredicted RBP13.27□□□□□ -0.28
SHMT2-203ENST00000449049 MC1RQ01726 317 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 RCAN2Q14206 197 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 UGT8Q16880 541 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 AGKQ53H12 422 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 C3orf38Q5JPI3 329 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 CAMKMTQ7Z624 323 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 SHISA5Q8N114 240 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 MMP21Q8N119 569 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ADAMTS18Q8TE60 1221 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 GFM2Q969S9 779 aaKnown RBP13.27□□□□□ -0.28
SHMT2-203ENST00000449049 CLIP3Q96DZ5 547 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ZBTB18Q99592 522 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 FAIM2Q9BWQ8 316 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ASPSCR1Q9BZE9 553 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 PRDM9Q9NQV7 894 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 HCN3Q9P1Z3 774 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 PCDHGA8Q9Y5G5 932 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 PCDHA9Q9Y5H5 950 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 SPACA6W5XKT8 324 aa13.27□□□□□ -0.28
SHMT2-203ENST00000449049 C1orf226A1L170 272 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 DCDC2BA2VCK2 349 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms