RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SFT2D3Q587I9 215 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 FRMD7Q6ZUT3 714 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 CPEB2Q7Z5Q1 589 aaKnown RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 OR4N5Q8IXE1 308 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 C9orf43Q8TAL5 461 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 AGAP11Q8TF27 550 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 UCN3Q969E3 161 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 NACC2Q96BF6 587 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 THOC3Q96J01 351 aaKnown RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 CENPKQ9BS16 269 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 NPLQ9BXD5 320 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 CLK4Q9HAZ1 481 aaKnown RBP12.57□□□□□ -0.4
SNHG4-201ENST00000448190 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 PRTFDC1Q9NRG1 225 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 TRPS1Q9UHF7 1281 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 DAPP1Q9UN19 280 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 PCSK5Q92824 1860 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
SNHG4-201ENST00000448190 TGFBR3LH3BV60 316 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 TMPRSS11DO60235 418 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ULK1O75385 1050 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 CRCPO75575 148 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 HPP00738 406 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 KRT6AP02538 564 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 KRT6BP04259 564 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 BPGMP07738 259 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 CPN2P22792 545 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 JAK1P23458 1154 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PPP2R1BP30154 601 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 KRT6CP48668 564 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ST13P50502 369 aaKnown RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PKNOX1P55347 436 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 RAB38P57729 211 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 OR4D2P58180 307 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 HMGCS1Q01581 520 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 AIMP2Q13155 320 aaKnown RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 SLC13A2Q13183 592 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 CUL3Q13618 768 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 TNFAIP8L3Q5GJ75 292 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 C18orf63Q68DL7 685 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 CLEC6AQ6EIG7 209 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 CYP20A1Q6UW02 462 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 RIPOR1Q6ZS17 1223 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ASB18Q6ZVZ8 466 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ANKRD42Q8N9B4 389 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 MYRIPQ8NFW9 859 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PGM2Q96G03 612 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ZNF717Q9BY31 904 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ROGDIQ9GZN7 287 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ZNF700Q9H0M5 742 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 SLC25A18Q9H1K4 315 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ADNPQ9H2P0 1102 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ZBTB20Q9HC78 741 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PRDM9Q9NQV7 894 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PNO1Q9NRX1 252 aaKnown RBP12.56□□□□□ -0.4
SNHG4-201ENST00000448190 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 SENP1Q9P0U3 644 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 MID2Q9UJV3 735 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 ATG4BQ9Y4P1 393 aa12.56□□□□□ -0.4
SNHG4-201ENST00000448190 LOC102723996A0A087X1L8 192 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 GLOD5A6NK44 160 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 A8MUI8 341 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 LDB3O75112 727 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 CHRNGP07510 517 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ETV4P43268 484 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 MAGOHP61326 146 aaKnown RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ATG14Q6ZNE5 492 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 CROCCP2Q86T23 111 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 GPR180Q86V85 440 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 DOK4Q8TEW6 326 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 SREK1Q8WXA9 508 aaKnown RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ARL8AQ96BM9 186 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 VPS50Q96JG6 964 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 WDR77Q9BQA1 342 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 SLC29A3Q9BZD2 475 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ZNF552Q9H707 407 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ZNF395Q9H8N7 513 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-201ENST00000448190 LYRM4Q9HD34 91 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 VPS29Q9UBQ0 182 aa12.55□□□□□ -0.4
SNHG4-201ENST00000448190 ATRXP46100 2492 aa12.54□□□□□ -0.4
SNHG4-201ENST00000448190 A0A1W2PR48 441 aa12.54□□□□□ -0.4
SNHG4-201ENST00000448190 CLDN4O14493 209 aa12.54□□□□□ -0.4
SNHG4-201ENST00000448190 CEACAM4O75871 244 aa12.54□□□□□ -0.4
SNHG4-201ENST00000448190 C1QL1O75973 258 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms