RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TP63Q9H3D4 680 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 NMNAT1Q9HAN9 279 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SMURF1Q9HCE7 757 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 HHATLQ9HCP6 504 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 FAM8A1Q9UBU6 413 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 NDOR1Q9UHB4 597 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 SLC25A13Q9UJS0 675 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 ACSL6Q9UKU0 697 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 TBC1D24Q9ULP9 559 aa18.25■□□□□ 0.51
SDCBP-204ENST00000447182 WBP11Q9Y2W2 641 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 LSM2Q9Y333 95 aaKnown RBP18.25■□□□□ 0.51
SDCBP-204ENST00000447182 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 TRBC2A0A5B9 178 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 WASH3PC4AMC7 463 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 GRM6O15303 877 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 UGT2B17O75795 530 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 KRT75O95678 551 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 KRT8P05787 483 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 CHI3L1P36222 383 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-204ENST00000447182 HTR3AP46098 478 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 OR2B6P58173 313 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 CYP4F8P98187 520 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 DOC2BQ14184 412 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 GANABQ14697 944 aaKnown RBP18.24■□□□□ 0.51
SDCBP-204ENST00000447182 STARD3Q14849 445 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 MEDAGQ5VYS4 303 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 UNC5DQ6UXZ4 953 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 FAM92BQ6ZTR7 304 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 Q6ZVL8 140 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 TMPRSS11BQ86T26 416 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 LAS2Q8IYD9 372 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 CMTM8Q8IZV2 173 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 VPS35Q96QK1 796 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 KCNS3Q9BQ31 491 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 RC3H2Q9HBD1 1191 aaKnown RBP18.24■□□□□ 0.51
SDCBP-204ENST00000447182 ASAH2Q9NR71 780 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 ERVK13-1Q9NX77 482 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 MAP4K5Q9Y4K4 846 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 SNX8Q9Y5X2 465 aa18.24■□□□□ 0.51
SDCBP-204ENST00000447182 HELZP42694 1942 aaKnown RBP18.24■□□□□ 0.51
SDCBP-204ENST00000447182 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 SSX4O60224 188 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ADAP00813 363 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 IFNW1P05000 195 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 PREPP48147 710 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 GJA8P48165 433 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 PRLHRP49683 370 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 COPZ1P61923 177 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 MC1RQ01726 317 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 TMEM201Q5SNT2 666 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 GAREM2Q75VX8 874 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 C16orf78Q8WTQ4 265 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 MRPS31Q92665 395 aaKnown RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 DMRT3Q9NQL9 472 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 C14orf119Q9NWQ9 140 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF221Q9UK13 617 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 PCDHGB2Q9Y5G2 931 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ATG13O75143 517 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF24P17028 368 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 TCEA1P23193 301 aaKnown RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 GABRR2P28476 465 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 CSTF2P33240 577 aaKnown RBP eCLIP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 CTSCP53634 463 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 C2orf80Q0P641 193 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 GPR50Q13585 617 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 TP53BP2Q13625 1128 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 Q6ZVU0 165 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 LILRA3Q8N6C8 439 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 Q8N9G6 341 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 FBXO15Q8NCQ5 510 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 BTN2A2Q8WVV5 523 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 APOBEC4Q8WW27 367 aaKnown RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 TP53INP1Q96A56 240 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 FOPNLQ96NB1 174 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 EFCAB11Q9BUY7 163 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 RIOK2Q9BVS4 552 aaKnown RBP18.23■□□□□ 0.51
SDCBP-204ENST00000447182 ASPNQ9BXN1 380 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 TPK1Q9H3S4 243 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 PRM3Q9NNZ6 103 aa18.23■□□□□ 0.51
SDCBP-204ENST00000447182 SLC35F4A4IF30 521 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 KLHL18O94889 574 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 RPS19P39019 145 aaKnown RBP18.22■□□□□ 0.51
SDCBP-204ENST00000447182 ETV3P41162 512 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 BCL7AQ4VC05 210 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 RNLSQ5VYX0 342 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 LHX8Q68G74 356 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 RASGEF1AQ8N9B8 481 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 WDFY2Q96P53 400 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 ZIC5Q96T25 663 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 TRIM39Q9HCM9 518 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 CCDC177Q9NQR7 707 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-204ENST00000447182 GULP1Q9UBP9 304 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 RAB23Q9ULC3 237 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 ENTPD6O75354 484 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 NPPBP16860 134 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 ILKQ13418 452 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms