RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
ERCC3-203ENST00000445889 COQ8BQ96D53 544 aa13.6□□□□□ -0.23
ERCC3-203ENST00000445889 C11orf24Q96F05 449 aaPredicted RBP13.6□□□□□ -0.23
ERCC3-203ENST00000445889 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
ERCC3-203ENST00000445889 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
ERCC3-203ENST00000445889 MALT1Q9UDY8 824 aa13.6□□□□□ -0.23
ERCC3-203ENST00000445889 HCN4Q9Y3Q4 1203 aa13.6□□□□□ -0.23
ERCC3-203ENST00000445889 A0A1W2PQ09 198 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 PLK4O00444 970 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 TNFRSF21O75509 655 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 SNX4O95219 450 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 OPRD1P41143 372 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 LIMK1P53667 647 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CD83Q01151 205 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 GPR50Q13585 617 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 PUM1Q14671 1186 aaKnown RBP eCLIP13.59□□□□□ -0.235e-7■■■■■ 30.6
ERCC3-203ENST00000445889 SEC23BQ15437 767 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 LIPJQ5W064 366 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 METTL2BQ6P1Q9 378 aaKnown RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 RNF180Q86T96 592 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 RAB43Q86YS6 212 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CBARPQ8N350 705 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 UBASH3BQ8TF42 649 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 RAD9AQ99638 391 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 RANGRFQ9HD47 186 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CCDC177Q9NQR7 707 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 STARD7Q9NQZ5 370 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 MEIOCA2RUB1 952 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 FADS2P1A8MWK0 482 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 SEMA7AO75326 666 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CYP17A1P05093 508 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 GABRR2P28476 465 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 IMPA1P29218 277 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CRISP1P54107 249 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF79Q15937 498 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 MLIPQ5VWP3 458 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 PLAG1Q6DJT9 500 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 TMPRSS11AQ6ZMR5 421 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 MSANTD1Q6ZTZ1 278 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 TCEANCQ8N8B7 351 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 CRELD1Q96HD1 420 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 C1GALT1Q9NS00 363 aa13.59□□□□□ -0.23
ERCC3-203ENST00000445889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 SH3BP5O60239 455 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 SOCS5O75159 536 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 HOXC5Q00444 222 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 TLE2Q04725 743 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 DEF8Q6ZN54 512 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 ZNF367Q7RTV3 350 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 CHTF18Q8WVB6 975 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 PIP5K1AQ99755 562 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 WRAP53Q9BUR4 548 aaKnown RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 POLR2J2Q9GZM3 115 aaKnown RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 CLN6Q9NWW5 311 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 SNX11Q9Y5W9 270 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 NOTOA8MTQ0 251 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 OR10H3O60404 316 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 AP2A2O94973 939 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 CDRT1O95170 752 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 RECKO95980 971 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 TIA1P31483 386 aaKnown RBP eCLIP13.58□□□□□ -0.244e-9■■■■□ 26.6
ERCC3-203ENST00000445889 TIE1P35590 1138 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 VEPH1Q14D04 833 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 TEAD4Q15561 434 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 BRAT1Q6PJG6 821 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 ZFP41Q8N8Y5 198 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 SYT14Q8NB59 555 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 OR9Q1Q8NGQ5 310 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 TMEM159Q96B96 161 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 CRNNQ9UBG3 495 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 ZNF282Q9UDV7 671 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 BTNL2Q9UIR0 455 aa13.58□□□□□ -0.24
ERCC3-203ENST00000445889 MN1Q10571 1320 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-203ENST00000445889 WASHC1A8K0Z3 465 aa13.57□□□□□ -0.24
ERCC3-203ENST00000445889 CAPN5O15484 640 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-203ENST00000445889 HBQ1P09105 142 aa13.57□□□□□ -0.24
ERCC3-203ENST00000445889 IL7P13232 177 aa13.57□□□□□ -0.24
ERCC3-203ENST00000445889 ALDH9A1P49189 494 aa13.57□□□□□ -0.24
ERCC3-203ENST00000445889 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
ERCC3-203ENST00000445889 SLBPQ14493 270 aaKnown RBP eCLIP13.57□□□□□ -0.24
ERCC3-203ENST00000445889 EIF4HQ15056 248 aaKnown RBP13.57□□□□□ -0.24
ERCC3-203ENST00000445889 TIMM50Q3ZCQ8 353 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms