RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SMIM24O75264 130 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 SBK3P0C264 359 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 HSD17B7P56937 341 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 TAS2R50P59544 299 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 SRSF11Q05519 484 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 SLC13A2Q13183 592 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 MEP1AQ16819 746 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 TMEM35AQ53FP2 167 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 KHDRBS2Q5VWX1 349 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 RPUSD3Q6P087 351 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 TIFABQ6ZNK6 161 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ZNF595Q8IYB9 648 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 TMEM151AQ8N4L1 468 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 OR52B6Q8NGF0 335 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ATP6V1E2Q96A05 226 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 MRPL57Q9BQC6 102 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 RNF32Q9H0A6 362 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 MRPL46Q9H2W6 279 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 L2HGDHQ9H9P8 463 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ZBTB26Q9HCK0 441 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 DMRT3Q9NQL9 472 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 AGPAT4Q9NRZ5 378 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ANKRD10Q9NXR5 420 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ADGRE2Q9UHX3 823 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
USE1-202ENST00000445667 PCDHGA11Q9Y5H2 935 aa13.81□□□□□ -0.2
USE1-202ENST00000445667 ANKUB1A6NFN9 424 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 H0YIV9 168 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 STX16-NPEPL1H3BU86 382 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 STX16O14662 325 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 UGDHO60701 494 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 MYO1DO94832 1006 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 HIST1H1TP22492 207 aaPredicted RBP13.8□□□□□ -0.2
USE1-202ENST00000445667 SERPINB1P30740 379 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 CD96P40200 585 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
USE1-202ENST00000445667 PIK3CBP42338 1070 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 SSR2P43308 183 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 NEK2P51955 445 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 ZRSR2Q15696 482 aaKnown RBP13.8□□□□□ -0.2
USE1-202ENST00000445667 FHL5Q5TD97 284 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 OR4C11Q6IEV9 310 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 METTL2BQ6P1Q9 378 aaKnown RBP13.8□□□□□ -0.2
USE1-202ENST00000445667 TUBA3EQ6PEY2 450 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
USE1-202ENST00000445667 SLC5A8Q8N695 610 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 L3MBTL4Q8NA19 623 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 ADAMTS18Q8TE60 1221 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 FAR1Q8WVX9 515 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 MTBPQ96DY7 904 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 SIGLEC12Q96PQ1 595 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 TAAR6Q96RI8 345 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 ROGDIQ9GZN7 287 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 LYRM4Q9HD34 91 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 TMEM216Q9P0N5 145 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 TBK1Q9UHD2 729 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 PCTPQ9UKL6 214 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 FBXW2Q9UKT8 454 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 TMCO1Q9UM00 188 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 CPAMD8Q8IZJ3 1885 aa13.8□□□□□ -0.2
USE1-202ENST00000445667 IQANK1A0A1B0GTG1 560 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 GABRR3A8MPY1 467 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 GOLGA8RI6L899 631 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 PPP6CO00743 305 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 PLPP1O14494 284 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 PRAMEF2O60811 474 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 CTNSO60931 367 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 LDB3O75112 727 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 SEMA7AO75326 666 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 CLDN9O95484 217 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 IFNA16P05015 189 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 TSPAN8P19075 237 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 PTX3P26022 381 aaPredicted RBP13.79□□□□□ -0.2
USE1-202ENST00000445667 CCNG1P51959 295 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 RAP1GDS1P52306 607 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 ID2Q02363 134 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 SLAMF1Q13291 335 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 RCN2Q14257 317 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 FAM180AQ6UWF9 173 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 APCDD1LQ8NCL9 501 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 SUN3Q8TAQ9 357 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 THAP3Q8WTV1 239 aaPredicted RBP13.79□□□□□ -0.2
USE1-202ENST00000445667 RGMAQ96B86 450 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 UTP23Q9BRU9 249 aaKnown RBP13.79□□□□□ -0.2
USE1-202ENST00000445667 ALOXE3Q9BYJ1 711 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 SEMA4BQ9NPR2 832 aaPredicted RBP13.79□□□□□ -0.2
USE1-202ENST00000445667 ABI3Q9P2A4 366 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
USE1-202ENST00000445667 PRRC2CQ9Y520 2896 aaKnown RBP13.79□□□□□ -0.2
USE1-202ENST00000445667 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 CNTRLQ7Z7A1 2325 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 TRBV11-1A0A0K0K1C0 115 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 A0A1B0GTL3 188 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 A8MT66 165 aa13.78□□□□□ -0.2
USE1-202ENST00000445667 FOXO6A8MYZ6 492 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms