RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 GPR37L1O60883 481 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 BMP10O95393 424 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 RPN2P04844 631 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 C7P10643 843 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 SSR2P43308 183 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 MVDP53602 400 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 RAD23AP54725 363 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 CDH12P55289 794 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 RPS21P63220 83 aaKnown RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 DEPDC1Q5TB30 811 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ENPP7Q6UWV6 458 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 HIPK1Q86Z02 1210 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 OR4E2Q8NGC2 313 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 OR52E1Q8NGJ3 308 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 UBE2E3Q969T4 207 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 C12orf43Q96C57 262 aaKnown RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 AMBNQ9NP70 447 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 M0R129 80 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 NTSR1P30989 418 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ZNF33BQ06732 778 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 KLHDC8AQ8IYD2 350 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 FBXL6Q8N531 539 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 NCSTNQ92542 709 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 TAMM41Q96BW9 452 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ABHD8Q96I13 439 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 C8orf4Q9NR00 106 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 KRT84Q9NSB2 600 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 RABL2AQ9UBK7 228 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ATP6V1HQ9UI12 483 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 IGKV1-8A0A0C4DH67 115 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 NAT2P11245 290 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 ACSL1P33121 698 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 TUBA4AP68366 448 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 UAP1L1Q3KQV9 507 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 TPRG1LQ5T0D9 272 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 SETD7Q8WTS6 366 aaKnown RBP16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 WDR34Q96EX3 536 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 SIPA1Q96FS4 1042 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 KCNC2Q96PR1 638 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 MENTQ9BUN1 341 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 EHD1Q9H4M9 534 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 ANKRA2Q9H9E1 313 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 MYNNQ9NPC7 610 aa16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 ARHGEF17Q96PE2 2063 aaPredicted RBP16.02■□□□□ 0.16
LAPTM4B-201ENST00000445593 ISM1B1AKI9 464 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 BCHEP06276 602 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 PIK3CBP42338 1070 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 PSMD7P51665 324 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 KCNJ10P78508 379 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 CDK6Q00534 326 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 SPIBQ01892 262 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 RPA4Q13156 261 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 C6orf141Q5SZD1 244 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 SHQ1Q6PI26 577 aaKnown RBP16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 CEACAM20Q6UY09 585 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 OR8K5Q8NH50 307 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 MS4A8Q9BY19 250 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 FBXW2Q9UKT8 454 aa16.02■□□□□ 0.15
LAPTM4B-201ENST00000445593 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 A0A1W2PS29 197 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 FAM227AF5H4B4 570 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 NDUFS4O43181 175 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 HOXD12P35452 270 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CSNK1G2P78368 415 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ZNF542PQ5EBM4 170 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 TMEM53Q6P2H8 277 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ZBTB8BQ8NAP8 495 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 DOK4Q8TEW6 326 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 TM4SF18Q96CE8 201 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 APOOQ9BUR5 198 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ZNF717Q9BY31 904 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 TM9SF3Q9HD45 589 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 RLIMQ9NVW2 624 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 A0A1W2PPW3 197 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CRHBPP24387 322 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CTHP32929 405 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 TRIM23P36406 574 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 MAGEA2P43356 314 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CDK9P50750 372 aaKnown RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 GPR155Q7Z3F1 870 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 TTC29Q8NA56 475 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 PIK3C3Q8NEB9 887 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 CACNB4O00305 520 aaPredicted RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ERI3O43414 337 aaKnown RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 ATE1O95260 518 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 DNAJA1P31689 397 aaKnown RBP16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 GPC1P35052 558 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 BSGP35613 385 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 HLCSP50747 726 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 LAIR2Q6ISS4 152 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
LAPTM4B-201ENST00000445593 OR5D16Q8NGK9 328 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms