RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 PRR30Q53SZ7 412 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 C10orf62Q5T681 223 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 ZNF793Q6ZN11 406 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 TDRPQ86YL5 185 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 CISD2Q8N5K1 135 aaKnown RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 AMER2Q8N7J2 671 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 OR52B6Q8NGF0 335 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 WDR20Q8TBZ3 569 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 MZB1Q8WU39 189 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 MAGEB10Q96LZ2 347 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 ZBTB26Q9HCK0 441 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 DCDC2Q9UHG0 476 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 PPT2Q9UMR5 302 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 COPG1Q9Y678 874 aaKnown RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 SPACA6W5XKT8 324 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 BLACEA4D250 179 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SAGE2PA6NJ88 616 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RTCAO00442 366 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 CTNSO60931 367 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SH3BGRLO75368 114 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 WDPCPO95876 746 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SHBGP04278 402 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RPS17P08708 135 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 PYGBP11216 843 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ARL1P40616 181 aaPredicted RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 TNFSF10P50591 281 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RAP1GDS1P52306 607 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 HNRNPFP52597 415 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 TAS2R50P59544 299 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RPS13P62277 151 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 HERVK_113P63132 956 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ZNF33BQ06732 778 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SLC13A2Q13183 592 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 CUL3Q13618 768 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RASA2Q15283 850 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 TERF2Q15554 542 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ZRSR2Q15696 482 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ACER2Q5QJU3 275 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RPUSD3Q6P087 351 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 RNF175Q8N4F7 328 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 FAM47BQ8NA70 645 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 TMEM52Q8NDY8 209 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 CATSPER1Q8NEC5 780 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 C7orf57Q8NEG2 295 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ELP5Q8TE02 316 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ZNF483Q8TF39 744 aaPredicted RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 NSUN5Q96P11 429 aaKnown RBP17.45■□□□□ 0.38
CCDC188-202ENST00000444532 ERVK-6Q9BXR3 956 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SLC29A3Q9BZD2 475 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 PLA2G3Q9NZ20 509 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 MAP10Q9P2G4 905 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 SHANK1Q9Y566 2161 aa17.45■□□□□ 0.38
CCDC188-202ENST00000444532 CNTRLQ7Z7A1 2325 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 TRAV17A0A0B4J275 112 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 GOLGA8RI6L899 631 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 SAP18O00422 153 aaKnown RBP17.44■□□□□ 0.38
CCDC188-202ENST00000444532 PLPP1O14494 284 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 CDK2AP1O14519 115 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 OTCP00480 354 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 TRAF3Q13114 568 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 MEP1AQ16819 746 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 GGTA1PQ4G0N0 100 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 MILR1Q7Z6M3 343 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 SLC5A8Q8N695 610 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 NFAM1Q8NET5 270 aaPredicted RBP17.44■□□□□ 0.38
CCDC188-202ENST00000444532 MYRIPQ8NFW9 859 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 OR1N1Q8NGS0 311 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 C19orf60Q96EN9 201 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 CDK15Q96Q40 435 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 CSF3RQ99062 836 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 BARD1Q99728 777 aaKnown RBP17.44■□□□□ 0.38
CCDC188-202ENST00000444532 MAPKAP1Q9BPZ7 522 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 SEMA4BQ9NPR2 832 aaPredicted RBP17.44■□□□□ 0.38
CCDC188-202ENST00000444532 ASF1BQ9NVP2 202 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 MS4A12Q9NXJ0 267 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 ABI3Q9P2A4 366 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 CLDN16Q9Y5I7 305 aa17.44■□□□□ 0.38
CCDC188-202ENST00000444532 NBASA2RRP1 2371 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 A0A1W2PPM1 405 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 OR5H15A6NDH6 313 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 DLX3O60479 287 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 SLU7O95391 586 aaKnown RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 ATP5F1P24539 256 aaPredicted RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 SLAMF1Q13291 335 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 FRG2Q64ET8 278 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 TTC19Q6DKK2 380 aaPredicted RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 CRLF3Q8IUI8 442 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 SLC22A9Q8IVM8 553 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 LGI4Q8N135 537 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 ZCCHC7Q8N3Z6 543 aaKnown RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 OR4F6Q8NGB9 312 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 FRG2BQ96QU4 278 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 SERPINI1Q99574 410 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 ADAP2Q9NPF8 381 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 PNO1Q9NRX1 252 aaKnown RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 AGPAT4Q9NRZ5 378 aa17.43■□□□□ 0.38
CCDC188-202ENST00000444532 PPIEQ9UNP9 301 aaKnown RBP17.43■□□□□ 0.38
CCDC188-202ENST00000444532 A8MUA0 341 aa17.42■□□□□ 0.38
CCDC188-202ENST00000444532 TGFBR3LH3BV60 316 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms