RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
AC003001.1-201ENST00000443247 CUX1P39880 1505 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 ABCA10Q8WWZ4 1543 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 A8MU10 97 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 TXNL1O43396 289 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 TSPY3P0CV98 308 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 TSPY8P0CW00 308 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 GP5P40197 560 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 PEX3P56589 373 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 BACE1P56817 501 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 CETN1Q12798 172 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 ABRQ12979 859 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 TMEM44Q2T9K0 475 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 RNF212Q495C1 297 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 MUC21Q5SSG8 566 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 TEX35Q5T0J7 233 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 CAVIN1Q6NZI2 390 aaKnown RBP3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 ADCK1Q86TW2 530 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 GPD1LQ8N335 351 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 OR13C5Q8NGS8 318 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 RHOXF1Q8NHV9 184 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 BPIFA2Q96DR5 249 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 PRMT1Q99873 361 aaKnown RBP3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 PINK1Q9BXM7 581 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 MTIF3Q9H2K0 278 aaKnown RBP3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 GIMAP2Q9UG22 337 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 UBQLN2Q9UHD9 624 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 SH3GLB1Q9Y371 365 aa3.34□□□□□ -1.87
AC003001.1-201ENST00000443247 CCDC88BA6NC98 1476 aa3.34□□□□□ -1.88
AC003001.1-201ENST00000443247 ERICH3Q5RHP9 1530 aa3.34□□□□□ -1.88
AC003001.1-201ENST00000443247 BIVM-ERCC5R4GMW8 1640 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 ADAMTSL3P82987 1691 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RIMS1Q86UR5 1692 aaKnown RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 PREX1Q8TCU6 1659 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 BCORL1Q5H9F3 1711 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 TRAV34A0A0B4J273 112 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 B4GAT1O43505 415 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 SCO2O43819 266 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 MT-ND1P03886 318 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RLN1P04808 185 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 KRT3P12035 628 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RPL9P32969 192 aaKnown RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 SLC1A4P43007 532 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 NPBWR1P48145 328 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RBBP4Q09028 425 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 TFCP2Q12800 502 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 POM121L1PQ3SYA9 428 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RFTN2Q52LD8 501 aaPredicted RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RNLSQ5VYX0 342 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 EMBQ6PCB8 327 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 VITQ6UXI7 678 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 RFPL4BQ6ZWI9 263 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 METTL23Q86XA0 190 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 C4orf19Q8IY42 314 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 BANPQ8N9N5 519 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 SNRNP27Q8WVK2 155 aaKnown RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 LIPHQ8WWY8 451 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 SLC35C1Q96A29 364 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 ALKBH3Q96Q83 286 aaPredicted RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 ZNF581Q9P0T4 197 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 HBS1LQ9Y450 684 aaKnown RBP3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 POMT1Q9Y6A1 747 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 MADDQ8WXG6 1647 aa3.33□□□□□ -1.88
AC003001.1-201ENST00000443247 TRBV5-4A0A0C4DH59 114 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 LOC390937A0A1W2PQ73 354 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 IGLON5A6NGN9 336 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 E9PAM4 449 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 FBP2O00757 339 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 TIMM44O43615 452 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 OR6B1O95007 311 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 SIX3O95343 332 aaPredicted RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 C3AR1Q16581 482 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 TWISTNBQ3B726 338 aaPredicted RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 ANKRD46Q86W74 232 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 ELMOD1Q8N336 334 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 TMEM99Q8N816 258 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 AGAP11Q8TF27 550 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 ITLN1Q8WWA0 313 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 DNASE1L2Q92874 299 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 SGF29Q96ES7 293 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 LSG1Q9H089 658 aaKnown RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 SP140LQ9H930 580 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 MARCH7Q9H992 704 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 UBE2TQ9NPD8 197 aaPredicted RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 THYN1Q9P016 225 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 SALL1Q9NSC2 1324 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 FHAD1B1AJZ9 1412 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 PRG4Q92954 1404 aaPredicted RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 PLB1Q6P1J6 1458 aa3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 ZCCHC11Q5TAX3 1644 aaKnown RBP3.32□□□□□ -1.88
AC003001.1-201ENST00000443247 RALGAPA1Q6GYQ0 2036 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 ILVBLA1L0T0 632 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 CCDC162PA2VCL2 907 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 ANKDD1BA6NHY2 528 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 KLLNB2CW77 178 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 KBTBD13C9JR72 458 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 CTDSPLO15194 276 aa3.31□□□□□ -1.88
AC003001.1-201ENST00000443247 FGF19O95750 216 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms