RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 GNA13Q14344 377 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 XKRXQ6PP77 449 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 IFNL1Q8IU54 200 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 NKAPQ8N5F7 415 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 OR6M1Q8NGM8 313 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 RBPMSQ93062 196 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 APIPQ96GX9 242 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 NARS2Q96I59 477 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MRM3Q9HC36 420 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MYOZ2Q9NPC6 264 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HCN3Q9P1Z3 774 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 KLHL21Q9UJP4 597 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 RAB23Q9ULC3 237 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 BAIAP2Q9UQB8 552 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 KLK4Q9Y5K2 254 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 DNAH12Q6ZR08 3092 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 NINQ8N4C6 2090 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 YKT6O15498 198 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 WISP3O95389 354 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 AGR2O95994 175 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MMP2P08253 660 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TRAPPC2P0DI81 140 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TRAPPC2BP0DI82 140 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ATF6P18850 670 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 LHCGRP22888 699 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 DEFA5Q01523 94 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SCAPQ12770 1279 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PLAG1Q6DJT9 500 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SLC27A1Q6PCB7 646 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 CRTC1Q6UUV9 634 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 FAM124AQ86V42 546 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF366Q8N895 744 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 UXS1Q8NBZ7 420 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ARRDC4Q8NCT1 418 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HMGB4Q8WW32 186 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HERVK_113Q902F9 699 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TTC9Q92623 222 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 C12orf66Q96MD2 445 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PPP1R2P1Q96PQ5 205 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SIGLEC11Q96RL6 698 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PAAF1Q9BRP4 392 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 GTPBP2Q9BX10 602 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PPA2Q9H2U2 334 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SPNS1Q9H2V7 528 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 C3orf14Q9HBI5 128 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 NANSQ9NR45 359 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 RBFOX1Q9NWB1 397 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TXNL4BQ9NX01 149 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ELOVL2Q9NXB9 296 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PPP1R14DQ9NXH3 145 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MRPL39Q9NYK5 338 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 FZD4Q9ULV1 537 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 EXO1Q9UQ84 846 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PCDHGA9Q9Y5G4 932 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 COL2A1P02458 1487 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 A0A075B6Q4 140 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MAGEB17A8MXT2 336 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 EEF1E1O43324 174 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PCDH7O60245 1069 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 KCNK5O95279 499 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PDYNP01213 254 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 RAF1P04049 648 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HBQ1P09105 142 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 DNASE1P24855 282 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HOXA11P31270 313 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SCNN1AP37088 669 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 AGFG1P52594 562 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TNK1Q13470 666 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 KLHL22Q53GT1 634 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 PRPF38BQ5VTL8 546 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF782Q6ZMW2 699 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 AGMOQ6ZNB7 445 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TRIM69Q86WT6 500 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 FTMTQ8N4E7 242 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TTLQ8NG68 377 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 OR6K2Q8NGY2 324 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 CD200R1Q8TD46 325 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 CRELD1Q96HD1 420 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SERPINB11Q96P15 392 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 GMLQ99445 158 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MTERF1Q99551 399 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SEC22CQ9BRL7 303 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ABCG5Q9H222 651 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TMEM245Q9H330 911 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 MROH8Q9H579 483 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 CLMPQ9H6B4 373 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 IFT46Q9NQC8 304 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 UBQLN2Q9UHD9 624 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 ERVW-1Q9UQF0 538 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 TRAPPC4Q9Y296 219 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
HDAC9-214ENST00000441542 SYNDIG1LA6NDD5 238 aa7.21□□□□□ -1.26
HDAC9-214ENST00000441542 MROH6A6NGR9 719 aa7.21□□□□□ -1.26
HDAC9-214ENST00000441542 CD8B2A6NJW9 211 aa7.21□□□□□ -1.26
HDAC9-214ENST00000441542 MANBAO00462 879 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms