RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PCDHGA9Q9Y5G4 932 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 PRRC2CQ9Y520 2896 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 COL12A1Q99715 3063 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 SAP18O00422 153 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 CHST10O43529 356 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 UGDHO60701 494 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 SNNO75324 88 aaPredicted RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 CLDN9O95484 217 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 IGHEP01854 428 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 SMIM10L1P0DMW3 83 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ARRB2P32121 409 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 GALNT1Q10472 559 aaPredicted RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ADPRMQ3LIE5 342 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 TUBB8Q3ZCM7 444 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 NIPAL1Q6NVV3 410 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 OR11G2Q8NGC1 345 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 ZNF473Q8WTR7 871 aaKnown RBP16.67■□□□□ 0.26
CCDC188-201ENST00000439765 SMIM10Q96HG1 83 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 FER1L6-AS2Q96M78 137 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 F2RL3Q96RI0 385 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 C20orf27Q9GZN8 174 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 THAP1Q9NVV9 213 aa16.67■□□□□ 0.26
CCDC188-201ENST00000439765 USP9YO00507 2555 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-201ENST00000439765 A0A1B0GTL3 188 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 PPP6CO00743 305 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 MLYCDO95822 493 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 TGFB1P01137 390 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 PDGFAP04085 211 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 CERS1P27544 350 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 LCP2Q13094 533 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 ARL13AQ5H913 290 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-201ENST00000439765 FAM219BQ5XKK7 198 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 LANCL3Q6ZV70 420 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 TEX19Q8NA77 164 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 FDCSPQ8NFU4 85 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 NACC2Q96BF6 587 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 TBC1D20Q96BZ9 403 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 OR1F2PQ96R84 312 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 SLC25A23Q9BV35 468 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 ZNF395Q9H8N7 513 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-201ENST00000439765 COPS7BQ9H9Q2 264 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-201ENST00000439765 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 ADAM21Q9UKJ8 722 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 PCDHGA11Q9Y5H2 935 aa16.66■□□□□ 0.26
CCDC188-201ENST00000439765 SPENQ96T58 3664 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 TCP11X1B4DZS4 312 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 H0YIV9 168 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 RTCAO00442 366 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 UBFD1O14562 309 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 LYPLA1O75608 230 aaPredicted RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 CHRNGP07510 517 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 FHP07954 510 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 COX6A1P12074 109 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 ZRSR2Q15696 482 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 ABHD17CQ6PCB6 329 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 CA13Q8N1Q1 262 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 L3MBTL4Q8NA19 623 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 OR4F6Q8NGB9 312 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 NTMT1Q9BV86 223 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 OR51B5Q9H339 312 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 EML4Q9HC35 981 aaKnown RBP16.65■□□□□ 0.26
CCDC188-201ENST00000439765 LANCL2Q9NS86 450 aa16.65■□□□□ 0.26
CCDC188-201ENST00000439765 ICE1Q9Y2F5 2266 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 A0A088AWK7 358 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 MAGEB17A8MXT2 336 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
CCDC188-201ENST00000439765 B4GALT2O60909 372 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 CEACAM4O75871 244 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 HSPA4LO95757 839 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 OTCP00480 354 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 RNH1P13489 461 aaKnown RBP16.64■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF10P21506 573 aaPredicted RBP16.64■□□□□ 0.25
CCDC188-201ENST00000439765 SERPINB1P30740 379 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 NEK2P51955 445 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 RPS13P62277 151 aaKnown RBP16.64■□□□□ 0.25
CCDC188-201ENST00000439765 PHEXP78562 749 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 OCRLQ01968 901 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 TGM3Q08188 693 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 LETMD1Q6P1Q0 360 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 AGAP11Q8TF27 550 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 METTL21AQ8WXB1 218 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 REPS1Q96D71 796 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 CMTM7Q96FZ5 175 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 VPS50Q96JG6 964 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 QRFPRQ96P65 431 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 KCNC2Q96PR1 638 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF382Q96SR6 550 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 SORT1Q99523 831 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 NUDT9Q9BW91 350 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF160Q9HCG1 818 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 ZNF225Q9UK10 706 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
CCDC188-201ENST00000439765 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.64■□□□□ 0.25
CCDC188-201ENST00000439765 CPAMD8Q8IZJ3 1885 aa16.63■□□□□ 0.25
CCDC188-201ENST00000439765 IGHV3-20A0A0C4DH32 117 aa16.63■□□□□ 0.25
CCDC188-201ENST00000439765 FAM227AF5H4B4 570 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms