RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SELENOMQ8WWX9 145 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 SREK1Q8WXA9 508 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 MTFMTQ96DP5 389 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CNDP1Q96KN2 507 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 TRMOQ9BU70 441 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 TUBB6Q9BUF5 446 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CENPHQ9H3R5 247 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 DDX31Q9H8H2 851 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 MLXIPLQ9NP71 852 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 MID1IP1Q9NPA3 183 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 PRDM9Q9NQV7 894 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 GPR83Q9NYM4 423 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 KCMF1Q9P0J7 381 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 SCN3AQ9NY46 2000 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 NUP210LQ5VU65 1888 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 IGKV3D-11A0A0A0MRZ8 115 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 OR2W5A6NFC9 320 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 GOLGA6L10A6NI86 522 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 A6NL46 340 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 FAM227AF5H4B4 570 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 MANBAO00462 879 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 CYR61O00622 381 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 UBFD1O14562 309 aaKnown RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 TM9SF1O15321 606 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ULK1O75385 1050 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ETHE1O95571 254 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PDYNP01213 254 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ALDH3A1P30838 453 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 BSGP35613 385 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PGDP52209 483 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 EEF1A2Q05639 463 aaKnown RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 CSTF3Q12996 717 aaKnown RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 SLAMF1Q13291 335 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PCOLCEQ15113 449 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 LACTB2Q53H82 288 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 SGO1Q5FBB7 561 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 RIPOR1Q6ZS17 1223 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PAGE2Q7Z2X7 111 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 NUDT13Q86X67 352 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 GBP7Q8N8V2 638 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 FDCSPQ8NFU4 85 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 IMMP1LQ96LU5 166 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PTCHD1Q96NR3 888 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 MAPKAP1Q9BPZ7 522 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 MESP1Q9BRJ9 268 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF717Q9BY31 904 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 SEMA4CQ9C0C4 833 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 LHPPQ9H008 270 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF160Q9HCG1 818 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ARGLU1Q9NWB6 273 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 LYARQ9NX58 379 aaKnown RBP11.11□□□□□ -0.63
HSPG2-206ENST00000439717 C5AR2Q9P296 337 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 PHF11Q9UIL8 331 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ADAM29Q9UKF5 820 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF451Q9Y4E5 1061 aa11.11□□□□□ -0.63
HSPG2-206ENST00000439717 A0A0A6YYD5 115 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 NPHS1O60500 1241 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 CTNSO60931 367 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 ALPPP05187 535 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SERPINA7P05543 415 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 ITGA3P26006 1051 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SERPINB5P36952 375 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 ETV4P43268 484 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 OR4D2P58180 307 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 BTG2P78543 158 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 GALNT1Q10472 559 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 CASP8Q14790 479 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 EXT1Q16394 746 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SFT2D3Q587I9 215 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 VWA5B1Q5TIE3 1220 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 MRM1Q6IN84 353 aaKnown RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 JMJD6Q6NYC1 403 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 CYP20A1Q6UW02 462 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 LANCL3Q6ZV70 420 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 GPR180Q86V85 440 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 METTL4Q8N3J2 472 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 TSLPQ969D9 159 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 LPAR4Q99677 370 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SMAD5Q99717 465 aaKnown RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SORBS1Q9BX66 1292 aaKnown RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 NECTIN3Q9NQS3 549 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 PRTFDC1Q9NRG1 225 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 FARSBQ9NSD9 589 aaKnown RBP11.1□□□□□ -0.63
HSPG2-206ENST00000439717 FBXW2Q9UKT8 454 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 SLC12A4Q9UP95 1085 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 TP53TG5Q9Y2B4 290 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms