RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SYCP3Q8IZU3 236 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 MNS1Q8NEH6 495 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 OR5M9Q8NGP3 310 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 RPLP0P6Q8NHW5 317 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 KRT35Q92764 455 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 PTP4A1Q93096 173 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 SYAP1Q96A49 352 aaPredicted RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 RUNDC3BQ96NL0 473 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 RASL10BQ96S79 203 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 SPXQ9BT56 116 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 NAPBQ9H115 298 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 C1orf21Q9H246 121 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 CUEDC2Q9H467 287 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 THAP9Q9H5L6 903 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 PANK3Q9H999 370 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 MID1IP1Q9NPA3 183 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 MIS18AQ9NYP9 233 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 NUDT4Q9NZJ9 180 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 KLK11Q9UBX7 282 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 BAIAP2L1Q9UHR4 511 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 HBS1LQ9Y450 684 aaKnown RBP3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 SNED1Q8TER0 1413 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 ACEP12821 1306 aa3.19□□□□□ -1.9
LSM1P1-201ENST00000438629 PIK3R4Q99570 1358 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 RNF103-CHMP3A0A140T963 221 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MAGEB16A2A368 324 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 KRT87PA6NCN2 255 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 INPP4BO15327 924 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 PRPSAP2O60256 369 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ACSL4O60488 711 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 STAM2O75886 525 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 BBOX1O75936 387 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 GLCEO94923 617 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 RPLP0P05388 317 aaKnown RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 GSTA2P09210 222 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 KRT5P13647 590 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 SRD5A2P31213 254 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 NT5C2P49902 561 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 CLCN4P51793 760 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 SH3BGRP55822 239 aaPredicted RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ACTN3Q08043 901 aaPredicted RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 CNTN1Q12860 1018 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 NFATC2Q13469 925 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 NFE2L1Q14494 772 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ACKR1Q16570 336 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MS4A18Q3C1V0 323 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 SPANXN4Q5MJ08 99 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 PODNL1Q6PEZ8 512 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 DOK6Q6PKX4 331 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 C5orf24Q7Z6I8 188 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 PRSS33Q8NF86 280 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 SPATA18Q8TC71 538 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 SEPT8Q92599 483 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF689Q96CS4 500 aaPredicted RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF396Q96N95 335 aaPredicted RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 ATP6V0BQ99437 205 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MTIF3Q9H2K0 278 aaKnown RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 C3orf14Q9HBI5 128 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MRPL17Q9NRX2 175 aaKnown RBP3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 DUSP12Q9UNI6 340 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 PLCL2Q9UPR0 1127 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MOB4Q9Y3A3 225 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 DCAF1Q9Y4B6 1507 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 NEDD4P46934 1319 aa3.18□□□□□ -1.9
LSM1P1-201ENST00000438629 MEX3AA1L020 520 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 FAM25EA8MYX2 175 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF732B4DXR9 585 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 SOCS3O14543 225 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 TNFSF12O43508 249 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 KIAA0754O94854 1291 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 SORBS2O94875 1100 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 FGF19O95750 216 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 PCP11498 1178 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 AOC1P19801 751 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 HOXD10P28358 340 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 STIP1P31948 543 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 RPL9P32969 192 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 CD86P42081 329 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 KHKP50053 298 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 POLR2FP61218 127 aaKnown RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 FKBP1BP68106 108 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 MECOMQ03112 1051 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 RPA4Q13156 261 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 CEACAM7Q14002 265 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 GCKRQ14397 625 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 INAQ16352 499 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 TEX35Q5T0J7 233 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 FAM182AQ5T1J6 154 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 PLPP4Q5VZY2 271 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF776Q68DI1 518 aaPredicted RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 IRGCQ6NXR0 463 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 OLFM4Q6UX06 510 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 CCBE1Q6UXH8 406 aaPredicted RBP3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 NHLRC1Q6VVB1 395 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 Q6ZVQ6 151 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 ZNF485Q8NCK3 441 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 OR9Q2Q8NGE9 314 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 OR52B6Q8NGF0 335 aa3.17□□□□□ -1.9
LSM1P1-201ENST00000438629 OR13C5Q8NGS8 318 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms