RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SSR2P43308 183 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 PCBP4P57723 403 aaKnown RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 SRP54P61011 504 aaKnown RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ACTR1AP61163 376 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 VLDLRP98155 873 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ZC3H12BQ5HYM0 836 aaKnown RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ZNF425Q6IV72 752 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 HMGB4Q8WW32 186 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 DOHHQ9BU89 302 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 GRIP2Q9C0E4 1043 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 TOR3AQ9H497 397 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 CXorf36Q9H7Y0 433 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 EHD3Q9NZN3 535 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ZNF624Q9P2J8 865 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-216ENST00000437340 ACSL6Q9UKU0 697 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 PCDHGA2Q9Y5H1 932 aa24.45■■□□□ 1.5
CPNE1-216ENST00000437340 A6NCN8 305 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 TRIM64CA6NLI5 447 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 GCM2O75603 506 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ALDH9A1P49189 494 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 MANFP55145 182 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SELENOWP63302 87 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 EEF1A2Q05639 463 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SCARB2Q14108 478 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ZIK1Q3SY52 487 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 NADK2Q4G0N4 442 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 TMEM26Q6ZUK4 368 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 OFCC1Q8IZS5 231 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 HS3ST5Q8IZT8 346 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ARL10Q8N8L6 244 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 MFSD9Q8NBP5 474 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SLC22A18Q96BI1 424 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ZBED6CLQ96FA7 236 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 TEFMQ96QE5 360 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 AICDAQ9GZX7 198 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 TMEM168Q9H0V1 697 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SOX17Q9H6I2 414 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 POLMQ9NP87 494 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ACSS1Q9NUB1 689 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 EBF1Q9UH73 591 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 PADI2Q9Y2J8 665 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 A0A087WXM4 84 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 F3P13726 295 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 PAX7P23759 505 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 DNAJA1P31689 397 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 TSFMP43897 325 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 CCR5P51681 352 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 PLA2G16P53816 162 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ITGA1P56199 1179 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 KCNJ10P78508 379 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 HYAL2Q12891 473 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 MLC1Q15049 377 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 Q6ZS52 159 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SRFBP1Q8NEF9 429 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 OR4E2Q8NGC2 313 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 OR5AK3PQ8NH89 298 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 DGCR14Q96DF8 476 aaKnown RBP24.44■■□□□ 1.5
CPNE1-216ENST00000437340 NEURL3Q96EH8 262 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 C7orf34Q96L11 122 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 FAIM2Q9BWQ8 316 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 SLAMF7Q9NQ25 335 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 FAM118AQ9NWS6 357 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 VNN3Q9NY84 501 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 MAP4K5Q9Y4K4 846 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 PCDHGA4Q9Y5G9 962 aa24.44■■□□□ 1.5
CPNE1-216ENST00000437340 ISM1B1AKI9 464 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 RASGRP1O95267 797 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 BMP10O95393 424 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 ARAFP10398 606 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 FPR1P21462 350 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 RABIFP47224 123 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 RAD23AP54725 363 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 ALG11Q2TAA5 492 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TMEM31Q5JXX7 168 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 KIAA1614Q5VZ46 1190 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 SAXO2Q658L1 398 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 FAM20CQ8IXL6 584 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 ZNF687Q8N1G0 1237 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 ZNF555Q8NEP9 628 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 PSMA8Q8TAA3 256 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 MS4A6EQ96DS6 147 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TPD52L3Q96J77 140 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 KCNC2Q96PR1 638 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TSC22D3Q99576 134 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 C17orf62Q9BQA9 187 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TWSG1Q9GZX9 223 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TEX10Q9NXF1 929 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-216ENST00000437340 ORC6Q9Y5N6 252 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 DGKBQ9Y6T7 804 aa24.43■■□□□ 1.5
CPNE1-216ENST00000437340 TMEM229AB2RXF0 380 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 PRAMEF26H0Y7S4 382 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 hCG_2039718K7EN88 272 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 SEC24DO94855 1032 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-216ENST00000437340 IFNA14P01570 189 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 SLC19A1P41440 591 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 DGKEP52429 567 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 CDK6Q00534 326 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 IQCCQ4KMZ1 466 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 CRB2Q5IJ48 1285 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ABHD17CQ6PCB6 329 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms